Gene : Brara.G02398 B. rapa FPsc v1.3
Defline:  (1 of 3) PTHR11945:SF152 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL12 Genomic Order:  2398
Name:  ? Brara.G02398 Secondary Identifier:  ? PAC:30634987
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.G02398 0.5kb upstream 0.5kb upstream 3767 true A07: 20263034-20266800 Brassica rapa FPsc
Brara.G02398 0.5kb upstream 0.5kb upstream 500 false A07: 20263034-20263533 Brassica rapa FPsc
Brara.G02398 0.5kb downstream 0.5kb downstream 3767 true A07: 20263534-20267300 Brassica rapa FPsc
Brara.G02398 0.5kb downstream 0.5kb downstream 500 false A07: 20266801-20267300 Brassica rapa FPsc
Brara.G02398 1.0kb upstream 1.0kb upstream 4267 true A07: 20262534-20266800 Brassica rapa FPsc
Brara.G02398 1.0kb upstream 1.0kb upstream 1000 false A07: 20262534-20263533 Brassica rapa FPsc
Brara.G02398 1.0kb downstream 1.0kb downstream 4267 true A07: 20263534-20267800 Brassica rapa FPsc
Brara.G02398 1.0kb downstream 1.0kb downstream 1000 false A07: 20266801-20267800 Brassica rapa FPsc
Brara.G02398 2.0kb upstream 2.0kb upstream 5267 true A07: 20261534-20266800 Brassica rapa FPsc
Brara.G02398 2.0kb upstream 2.0kb upstream 2000 false A07: 20261534-20263533 Brassica rapa FPsc
Brara.G02398 2.0kb downstream 2.0kb downstream 5267 true A07: 20263534-20268800 Brassica rapa FPsc
Brara.G02398 2.0kb downstream 2.0kb downstream 2000 false A07: 20266801-20268800 Brassica rapa FPsc
Brara.G02398 5.0kb upstream 5.0kb upstream 8267 true A07: 20258534-20266800 Brassica rapa FPsc
Brara.G02398 5.0kb upstream 5.0kb upstream 5000 false A07: 20258534-20263533 Brassica rapa FPsc
Brara.G02398 5.0kb downstream 5.0kb downstream 8267 true A07: 20263534-20271800 Brassica rapa FPsc
Brara.G02398 5.0kb downstream 5.0kb downstream 5000 false A07: 20266801-20271800 Brassica rapa FPsc
Brara.G02398 10.0kb upstream 10.0kb upstream 13267 true A07: 20253534-20266800 Brassica rapa FPsc
Brara.G02398 10.0kb upstream 10.0kb upstream 10000 false A07: 20253534-20263533 Brassica rapa FPsc
Brara.G02398 10.0kb downstream 10.0kb downstream 13267 true A07: 20263534-20276800 Brassica rapa FPsc
Brara.G02398 10.0kb downstream 10.0kb downstream 10000 false A07: 20266801-20276800 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026526 5273 Angiosperm View MSA
122351809 5261 Brassicaceae Singleton cluster - no MSA
123790642 5264 Brassicales-Malvales Singleton cluster - no MSA
124288585 5266 SBM Singleton cluster - no MSA
124251112 5268 Malvidae View MSA
124065817 5270 Rosid View MSA
123738815 5271 Pentapetalae View MSA
122789214 5272 Eudicot View MSA
121296369 5274 Embryophyte View MSA
123334545 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier