Gene : Brara.A03598 B. rapa FPsc v1.3
Defline:  (1 of 1) PTHR11062//PTHR11062:SF90 - EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED Genomic Order:  3598
Name:  ? Brara.A03598 Secondary Identifier:  ? PAC:30637937
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-5980 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.A03598 0.5kb upstream 0.5kb upstream 2607 true A01: 29091425-29094031 Brassica rapa FPsc
Brara.A03598 0.5kb upstream 0.5kb upstream 500 false A01: 29091425-29091924 Brassica rapa FPsc
Brara.A03598 0.5kb downstream 0.5kb downstream 2607 true A01: 29091925-29094531 Brassica rapa FPsc
Brara.A03598 0.5kb downstream 0.5kb downstream 500 false A01: 29094032-29094531 Brassica rapa FPsc
Brara.A03598 1.0kb upstream 1.0kb upstream 3107 true A01: 29090925-29094031 Brassica rapa FPsc
Brara.A03598 1.0kb upstream 1.0kb upstream 1000 false A01: 29090925-29091924 Brassica rapa FPsc
Brara.A03598 1.0kb downstream 1.0kb downstream 3107 true A01: 29091925-29095031 Brassica rapa FPsc
Brara.A03598 1.0kb downstream 1.0kb downstream 1000 false A01: 29094032-29095031 Brassica rapa FPsc
Brara.A03598 2.0kb upstream 2.0kb upstream 4107 true A01: 29089925-29094031 Brassica rapa FPsc
Brara.A03598 2.0kb upstream 2.0kb upstream 2000 false A01: 29089925-29091924 Brassica rapa FPsc
Brara.A03598 2.0kb downstream 2.0kb downstream 4107 true A01: 29091925-29096031 Brassica rapa FPsc
Brara.A03598 2.0kb downstream 2.0kb downstream 2000 false A01: 29094032-29096031 Brassica rapa FPsc
Brara.A03598 5.0kb upstream 5.0kb upstream 7107 true A01: 29086925-29094031 Brassica rapa FPsc
Brara.A03598 5.0kb upstream 5.0kb upstream 5000 false A01: 29086925-29091924 Brassica rapa FPsc
Brara.A03598 5.0kb downstream 5.0kb downstream 7107 true A01: 29091925-29099031 Brassica rapa FPsc
Brara.A03598 5.0kb downstream 5.0kb downstream 5000 false A01: 29094032-29099031 Brassica rapa FPsc
Brara.A03598 10.0kb upstream 10.0kb upstream 12107 true A01: 29081925-29094031 Brassica rapa FPsc
Brara.A03598 10.0kb upstream 10.0kb upstream 10000 false A01: 29081925-29091924 Brassica rapa FPsc
Brara.A03598 10.0kb downstream 10.0kb downstream 12107 true A01: 29091925-29104031 Brassica rapa FPsc
Brara.A03598 10.0kb downstream 10.0kb downstream 10000 false A01: 29094032-29104031 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365835 5261 Brassicaceae View MSA
123835010 5264 Brassicales-Malvales View MSA
124321992 5266 SBM View MSA
124246530 5268 Malvidae View MSA
124070625 5270 Rosid View MSA
123746709 5271 Pentapetalae View MSA
122795318 5272 Eudicot View MSA
122050562 5273 Angiosperm View MSA
121350610 5274 Embryophyte View MSA
123428712 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier