Gene : Brara.D02046 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR31500:SF0 - AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN Genomic Order:  2046
Name:  ? Brara.D02046 Secondary Identifier:  ? PAC:30622704
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.D02046 0.5kb upstream 0.5kb upstream 2752 true A04: 16995233-16997984 Brassica rapa FPsc
Brara.D02046 0.5kb upstream 0.5kb upstream 500 false A04: 16995233-16995732 Brassica rapa FPsc
Brara.D02046 0.5kb downstream 0.5kb downstream 2752 true A04: 16995733-16998484 Brassica rapa FPsc
Brara.D02046 0.5kb downstream 0.5kb downstream 500 false A04: 16997985-16998484 Brassica rapa FPsc
Brara.D02046 1.0kb upstream 1.0kb upstream 3252 true A04: 16994733-16997984 Brassica rapa FPsc
Brara.D02046 1.0kb upstream 1.0kb upstream 1000 false A04: 16994733-16995732 Brassica rapa FPsc
Brara.D02046 1.0kb downstream 1.0kb downstream 3252 true A04: 16995733-16998984 Brassica rapa FPsc
Brara.D02046 1.0kb downstream 1.0kb downstream 1000 false A04: 16997985-16998984 Brassica rapa FPsc
Brara.D02046 2.0kb upstream 2.0kb upstream 4252 true A04: 16993733-16997984 Brassica rapa FPsc
Brara.D02046 2.0kb upstream 2.0kb upstream 2000 false A04: 16993733-16995732 Brassica rapa FPsc
Brara.D02046 2.0kb downstream 2.0kb downstream 4252 true A04: 16995733-16999984 Brassica rapa FPsc
Brara.D02046 2.0kb downstream 2.0kb downstream 2000 false A04: 16997985-16999984 Brassica rapa FPsc
Brara.D02046 5.0kb upstream 5.0kb upstream 7252 true A04: 16990733-16997984 Brassica rapa FPsc
Brara.D02046 5.0kb upstream 5.0kb upstream 5000 false A04: 16990733-16995732 Brassica rapa FPsc
Brara.D02046 5.0kb downstream 5.0kb downstream 7252 true A04: 16995733-17002984 Brassica rapa FPsc
Brara.D02046 5.0kb downstream 5.0kb downstream 5000 false A04: 16997985-17002984 Brassica rapa FPsc
Brara.D02046 10.0kb upstream 10.0kb upstream 12252 true A04: 16985733-16997984 Brassica rapa FPsc
Brara.D02046 10.0kb upstream 10.0kb upstream 10000 false A04: 16985733-16995732 Brassica rapa FPsc
Brara.D02046 10.0kb downstream 10.0kb downstream 12252 true A04: 16995733-17007984 Brassica rapa FPsc
Brara.D02046 10.0kb downstream 10.0kb downstream 10000 false A04: 16997985-17007984 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377471 5261 Brassicaceae View MSA
123834471 5264 Brassicales-Malvales View MSA
124336935 5266 SBM View MSA
124238398 5268 Malvidae View MSA
124069070 5270 Rosid View MSA
123753724 5271 Pentapetalae View MSA
122796118 5272 Eudicot View MSA
122049850 5273 Angiosperm View MSA
121348420 5274 Embryophyte View MSA
123380859 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier