Gene : Brara.H00253 B. rapa FPsc v1.3
Defline:  (1 of 5) 6.1.1.7 - Alanine--tRNA ligase / Alanyl-tRNA synthetase Genomic Order:  253
Name:  ? Brara.H00253 Secondary Identifier:  ? PAC:30649023
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc TRNA-CHARGING-PWY Brassica rapa FPsc pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.H00253 0.5kb upstream 0.5kb upstream 7696 true A08: 2323600-2331295 Brassica rapa FPsc
Brara.H00253 0.5kb upstream 0.5kb upstream 500 false A08: 2323600-2324099 Brassica rapa FPsc
Brara.H00253 0.5kb downstream 0.5kb downstream 7696 true A08: 2324100-2331795 Brassica rapa FPsc
Brara.H00253 0.5kb downstream 0.5kb downstream 500 false A08: 2331296-2331795 Brassica rapa FPsc
Brara.H00253 1.0kb upstream 1.0kb upstream 8196 true A08: 2323100-2331295 Brassica rapa FPsc
Brara.H00253 1.0kb upstream 1.0kb upstream 1000 false A08: 2323100-2324099 Brassica rapa FPsc
Brara.H00253 1.0kb downstream 1.0kb downstream 8196 true A08: 2324100-2332295 Brassica rapa FPsc
Brara.H00253 1.0kb downstream 1.0kb downstream 1000 false A08: 2331296-2332295 Brassica rapa FPsc
Brara.H00253 2.0kb upstream 2.0kb upstream 9196 true A08: 2322100-2331295 Brassica rapa FPsc
Brara.H00253 2.0kb upstream 2.0kb upstream 2000 false A08: 2322100-2324099 Brassica rapa FPsc
Brara.H00253 2.0kb downstream 2.0kb downstream 9196 true A08: 2324100-2333295 Brassica rapa FPsc
Brara.H00253 2.0kb downstream 2.0kb downstream 2000 false A08: 2331296-2333295 Brassica rapa FPsc
Brara.H00253 5.0kb upstream 5.0kb upstream 12196 true A08: 2319100-2331295 Brassica rapa FPsc
Brara.H00253 5.0kb upstream 5.0kb upstream 5000 false A08: 2319100-2324099 Brassica rapa FPsc
Brara.H00253 5.0kb downstream 5.0kb downstream 12196 true A08: 2324100-2336295 Brassica rapa FPsc
Brara.H00253 5.0kb downstream 5.0kb downstream 5000 false A08: 2331296-2336295 Brassica rapa FPsc
Brara.H00253 10.0kb upstream 10.0kb upstream 17196 true A08: 2314100-2331295 Brassica rapa FPsc
Brara.H00253 10.0kb upstream 10.0kb upstream 10000 false A08: 2314100-2324099 Brassica rapa FPsc
Brara.H00253 10.0kb downstream 10.0kb downstream 17196 true A08: 2324100-2341295 Brassica rapa FPsc
Brara.H00253 10.0kb downstream 10.0kb downstream 10000 false A08: 2331296-2341295 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364421 5261 Brassicaceae View MSA
123830021 5264 Brassicales-Malvales View MSA
124341952 5266 SBM View MSA
124240298 5268 Malvidae View MSA
124063784 5270 Rosid View MSA
123740226 5271 Pentapetalae View MSA
122791486 5272 Eudicot View MSA
122047019 5273 Angiosperm View MSA
121346985 5274 Embryophyte View MSA
123424131 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier