Gene : Brara.B00245 B. rapa FPsc v1.3
Defline:  (1 of 6) 1.4.1.3 - Glutamate dehydrogenase (NAD(P)(+)) / Glutamic dehydrogenase Genomic Order:  245
Name:  ? Brara.B00245 Secondary Identifier:  ? PAC:30609396
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc ARGININE-SYN4-PWY Brassica rapa FPsc pathologic  
BrapaFPsc GLUDEG-I-PWY Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.B00245 0.5kb upstream 0.5kb upstream 3258 true A02: 1187016-1190273 Brassica rapa FPsc
Brara.B00245 0.5kb upstream 0.5kb upstream 500 false A02: 1187016-1187515 Brassica rapa FPsc
Brara.B00245 0.5kb downstream 0.5kb downstream 3258 true A02: 1187516-1190773 Brassica rapa FPsc
Brara.B00245 0.5kb downstream 0.5kb downstream 500 false A02: 1190274-1190773 Brassica rapa FPsc
Brara.B00245 1.0kb upstream 1.0kb upstream 3758 true A02: 1186516-1190273 Brassica rapa FPsc
Brara.B00245 1.0kb upstream 1.0kb upstream 1000 false A02: 1186516-1187515 Brassica rapa FPsc
Brara.B00245 1.0kb downstream 1.0kb downstream 3758 true A02: 1187516-1191273 Brassica rapa FPsc
Brara.B00245 1.0kb downstream 1.0kb downstream 1000 false A02: 1190274-1191273 Brassica rapa FPsc
Brara.B00245 2.0kb upstream 2.0kb upstream 4758 true A02: 1185516-1190273 Brassica rapa FPsc
Brara.B00245 2.0kb upstream 2.0kb upstream 2000 false A02: 1185516-1187515 Brassica rapa FPsc
Brara.B00245 2.0kb downstream 2.0kb downstream 4758 true A02: 1187516-1192273 Brassica rapa FPsc
Brara.B00245 2.0kb downstream 2.0kb downstream 2000 false A02: 1190274-1192273 Brassica rapa FPsc
Brara.B00245 5.0kb upstream 5.0kb upstream 7758 true A02: 1182516-1190273 Brassica rapa FPsc
Brara.B00245 5.0kb upstream 5.0kb upstream 5000 false A02: 1182516-1187515 Brassica rapa FPsc
Brara.B00245 5.0kb downstream 5.0kb downstream 7758 true A02: 1187516-1195273 Brassica rapa FPsc
Brara.B00245 5.0kb downstream 5.0kb downstream 5000 false A02: 1190274-1195273 Brassica rapa FPsc
Brara.B00245 10.0kb upstream 10.0kb upstream 12758 true A02: 1177516-1190273 Brassica rapa FPsc
Brara.B00245 10.0kb upstream 10.0kb upstream 10000 false A02: 1177516-1187515 Brassica rapa FPsc
Brara.B00245 10.0kb downstream 10.0kb downstream 12758 true A02: 1187516-1200273 Brassica rapa FPsc
Brara.B00245 10.0kb downstream 10.0kb downstream 10000 false A02: 1190274-1200273 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122345276 5261 Brassicaceae Singleton cluster - no MSA
123840099 5264 Brassicales-Malvales View MSA
124351160 5266 SBM View MSA
124247496 5268 Malvidae View MSA
124068795 5270 Rosid View MSA
123747810 5271 Pentapetalae View MSA
122788460 5272 Eudicot View MSA
122043764 5273 Angiosperm View MSA
121350758 5274 Embryophyte View MSA
123427828 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier