Gene : Brara.B00283 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR11452:SF18 - ALPHA-GALACTOSIDASE 1 Genomic Order:  283
Name:  ? Brara.B00283 Secondary Identifier:  ? PAC:30608886
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY0-1301 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-6527 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.B00283 0.5kb upstream 0.5kb upstream 2978 true A02: 1348358-1351335 Brassica rapa FPsc
Brara.B00283 0.5kb upstream 0.5kb upstream 500 false A02: 1350836-1351335 Brassica rapa FPsc
Brara.B00283 0.5kb downstream 0.5kb downstream 2978 true A02: 1347858-1350835 Brassica rapa FPsc
Brara.B00283 0.5kb downstream 0.5kb downstream 500 false A02: 1347858-1348357 Brassica rapa FPsc
Brara.B00283 1.0kb upstream 1.0kb upstream 3478 true A02: 1348358-1351835 Brassica rapa FPsc
Brara.B00283 1.0kb upstream 1.0kb upstream 1000 false A02: 1350836-1351835 Brassica rapa FPsc
Brara.B00283 1.0kb downstream 1.0kb downstream 3478 true A02: 1347358-1350835 Brassica rapa FPsc
Brara.B00283 1.0kb downstream 1.0kb downstream 1000 false A02: 1347358-1348357 Brassica rapa FPsc
Brara.B00283 2.0kb upstream 2.0kb upstream 4478 true A02: 1348358-1352835 Brassica rapa FPsc
Brara.B00283 2.0kb upstream 2.0kb upstream 2000 false A02: 1350836-1352835 Brassica rapa FPsc
Brara.B00283 2.0kb downstream 2.0kb downstream 4478 true A02: 1346358-1350835 Brassica rapa FPsc
Brara.B00283 2.0kb downstream 2.0kb downstream 2000 false A02: 1346358-1348357 Brassica rapa FPsc
Brara.B00283 5.0kb upstream 5.0kb upstream 7478 true A02: 1348358-1355835 Brassica rapa FPsc
Brara.B00283 5.0kb upstream 5.0kb upstream 5000 false A02: 1350836-1355835 Brassica rapa FPsc
Brara.B00283 5.0kb downstream 5.0kb downstream 7478 true A02: 1343358-1350835 Brassica rapa FPsc
Brara.B00283 5.0kb downstream 5.0kb downstream 5000 false A02: 1343358-1348357 Brassica rapa FPsc
Brara.B00283 10.0kb upstream 10.0kb upstream 12478 true A02: 1348358-1360835 Brassica rapa FPsc
Brara.B00283 10.0kb upstream 10.0kb upstream 10000 false A02: 1350836-1360835 Brassica rapa FPsc
Brara.B00283 10.0kb downstream 10.0kb downstream 12478 true A02: 1338358-1350835 Brassica rapa FPsc
Brara.B00283 10.0kb downstream 10.0kb downstream 10000 false A02: 1338358-1348357 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377510 5261 Brassicaceae View MSA
123835368 5264 Brassicales-Malvales View MSA
124322036 5266 SBM View MSA
124237729 5268 Malvidae View MSA
124069485 5270 Rosid View MSA
123749303 5271 Pentapetalae View MSA
122796981 5272 Eudicot View MSA
122048958 5273 Angiosperm View MSA
121347217 5274 Embryophyte View MSA
123428348 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier