Gene : Brara.H00113 B. rapa FPsc v1.3
Defline:  (1 of 6) PTHR22835:SF174 - GDSL ESTERASE/LIPASE 1-RELATED Genomic Order:  113
Name:  ? Brara.H00113 Secondary Identifier:  ? PAC:30649685
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-6303 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.H00113 0.5kb upstream 0.5kb upstream 2436 true A08: 960508-962943 Brassica rapa FPsc
Brara.H00113 0.5kb upstream 0.5kb upstream 500 false A08: 962444-962943 Brassica rapa FPsc
Brara.H00113 0.5kb downstream 0.5kb downstream 2436 true A08: 960008-962443 Brassica rapa FPsc
Brara.H00113 0.5kb downstream 0.5kb downstream 500 false A08: 960008-960507 Brassica rapa FPsc
Brara.H00113 1.0kb upstream 1.0kb upstream 2936 true A08: 960508-963443 Brassica rapa FPsc
Brara.H00113 1.0kb upstream 1.0kb upstream 1000 false A08: 962444-963443 Brassica rapa FPsc
Brara.H00113 1.0kb downstream 1.0kb downstream 2936 true A08: 959508-962443 Brassica rapa FPsc
Brara.H00113 1.0kb downstream 1.0kb downstream 1000 false A08: 959508-960507 Brassica rapa FPsc
Brara.H00113 2.0kb upstream 2.0kb upstream 3936 true A08: 960508-964443 Brassica rapa FPsc
Brara.H00113 2.0kb upstream 2.0kb upstream 2000 false A08: 962444-964443 Brassica rapa FPsc
Brara.H00113 2.0kb downstream 2.0kb downstream 3936 true A08: 958508-962443 Brassica rapa FPsc
Brara.H00113 2.0kb downstream 2.0kb downstream 2000 false A08: 958508-960507 Brassica rapa FPsc
Brara.H00113 5.0kb upstream 5.0kb upstream 6936 true A08: 960508-967443 Brassica rapa FPsc
Brara.H00113 5.0kb upstream 5.0kb upstream 5000 false A08: 962444-967443 Brassica rapa FPsc
Brara.H00113 5.0kb downstream 5.0kb downstream 6936 true A08: 955508-962443 Brassica rapa FPsc
Brara.H00113 5.0kb downstream 5.0kb downstream 5000 false A08: 955508-960507 Brassica rapa FPsc
Brara.H00113 10.0kb upstream 10.0kb upstream 11936 true A08: 960508-972443 Brassica rapa FPsc
Brara.H00113 10.0kb upstream 10.0kb upstream 10000 false A08: 962444-972443 Brassica rapa FPsc
Brara.H00113 10.0kb downstream 10.0kb downstream 11936 true A08: 950508-962443 Brassica rapa FPsc
Brara.H00113 10.0kb downstream 10.0kb downstream 10000 false A08: 950508-960507 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371746 5261 Brassicaceae View MSA
123841664 5264 Brassicales-Malvales View MSA
124349446 5266 SBM View MSA
124250380 5268 Malvidae View MSA
124074404 5270 Rosid View MSA
123753785 5271 Pentapetalae View MSA
122797352 5272 Eudicot View MSA
122051674 5273 Angiosperm View MSA
121351762 5274 Embryophyte View MSA
123428079 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier