Gene : Brara.B00290 B. rapa FPsc v1.3
Defline:  (1 of 8) PTHR24078:SF279 - DUPLICATED SANT DNA-BINDING DOMAIN-CONTAINING PROTEIN Genomic Order:  290
Name:  ? Brara.B00290 Secondary Identifier:  ? PAC:30611042
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.B00290 0.5kb upstream 0.5kb upstream 1978 true A02: 1367959-1369936 Brassica rapa FPsc
Brara.B00290 0.5kb upstream 0.5kb upstream 500 false A02: 1369437-1369936 Brassica rapa FPsc
Brara.B00290 0.5kb downstream 0.5kb downstream 1978 true A02: 1367459-1369436 Brassica rapa FPsc
Brara.B00290 0.5kb downstream 0.5kb downstream 500 false A02: 1367459-1367958 Brassica rapa FPsc
Brara.B00290 1.0kb upstream 1.0kb upstream 2478 true A02: 1367959-1370436 Brassica rapa FPsc
Brara.B00290 1.0kb upstream 1.0kb upstream 1000 false A02: 1369437-1370436 Brassica rapa FPsc
Brara.B00290 1.0kb downstream 1.0kb downstream 2478 true A02: 1366959-1369436 Brassica rapa FPsc
Brara.B00290 1.0kb downstream 1.0kb downstream 1000 false A02: 1366959-1367958 Brassica rapa FPsc
Brara.B00290 2.0kb upstream 2.0kb upstream 3478 true A02: 1367959-1371436 Brassica rapa FPsc
Brara.B00290 2.0kb upstream 2.0kb upstream 2000 false A02: 1369437-1371436 Brassica rapa FPsc
Brara.B00290 2.0kb downstream 2.0kb downstream 3478 true A02: 1365959-1369436 Brassica rapa FPsc
Brara.B00290 2.0kb downstream 2.0kb downstream 2000 false A02: 1365959-1367958 Brassica rapa FPsc
Brara.B00290 5.0kb upstream 5.0kb upstream 6478 true A02: 1367959-1374436 Brassica rapa FPsc
Brara.B00290 5.0kb upstream 5.0kb upstream 5000 false A02: 1369437-1374436 Brassica rapa FPsc
Brara.B00290 5.0kb downstream 5.0kb downstream 6478 true A02: 1362959-1369436 Brassica rapa FPsc
Brara.B00290 5.0kb downstream 5.0kb downstream 5000 false A02: 1362959-1367958 Brassica rapa FPsc
Brara.B00290 10.0kb upstream 10.0kb upstream 11478 true A02: 1367959-1379436 Brassica rapa FPsc
Brara.B00290 10.0kb upstream 10.0kb upstream 10000 false A02: 1369437-1379436 Brassica rapa FPsc
Brara.B00290 10.0kb downstream 10.0kb downstream 11478 true A02: 1357959-1369436 Brassica rapa FPsc
Brara.B00290 10.0kb downstream 10.0kb downstream 10000 false A02: 1357959-1367958 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122345827 5261 Brassicaceae Singleton cluster - no MSA
123785611 5264 Brassicales-Malvales Singleton cluster - no MSA
124283745 5266 SBM Singleton cluster - no MSA
124138092 5268 Malvidae Singleton cluster - no MSA
123865704 5270 Rosid Singleton cluster - no MSA
123750752 5271 Pentapetalae View MSA
122788591 5272 Eudicot View MSA
122045009 5273 Angiosperm View MSA
121349410 5274 Embryophyte View MSA
123426863 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier