Gene : Brara.H00160 B. rapa FPsc v1.3
Defline:  (1 of 4) PTHR34191:SF3 - F6D8.10-RELATED Genomic Order:  160
Name:  ? Brara.H00160 Secondary Identifier:  ? PAC:30647849
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc GLUCONEO-PWY Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7115 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.H00160 0.5kb upstream 0.5kb upstream 1386 true A08: 1418462-1419847 Brassica rapa FPsc
Brara.H00160 0.5kb upstream 0.5kb upstream 500 false A08: 1419348-1419847 Brassica rapa FPsc
Brara.H00160 0.5kb downstream 0.5kb downstream 1386 true A08: 1417962-1419347 Brassica rapa FPsc
Brara.H00160 0.5kb downstream 0.5kb downstream 500 false A08: 1417962-1418461 Brassica rapa FPsc
Brara.H00160 1.0kb upstream 1.0kb upstream 1886 true A08: 1418462-1420347 Brassica rapa FPsc
Brara.H00160 1.0kb upstream 1.0kb upstream 1000 false A08: 1419348-1420347 Brassica rapa FPsc
Brara.H00160 1.0kb downstream 1.0kb downstream 1886 true A08: 1417462-1419347 Brassica rapa FPsc
Brara.H00160 1.0kb downstream 1.0kb downstream 1000 false A08: 1417462-1418461 Brassica rapa FPsc
Brara.H00160 2.0kb upstream 2.0kb upstream 2886 true A08: 1418462-1421347 Brassica rapa FPsc
Brara.H00160 2.0kb upstream 2.0kb upstream 2000 false A08: 1419348-1421347 Brassica rapa FPsc
Brara.H00160 2.0kb downstream 2.0kb downstream 2886 true A08: 1416462-1419347 Brassica rapa FPsc
Brara.H00160 2.0kb downstream 2.0kb downstream 2000 false A08: 1416462-1418461 Brassica rapa FPsc
Brara.H00160 5.0kb upstream 5.0kb upstream 5886 true A08: 1418462-1424347 Brassica rapa FPsc
Brara.H00160 5.0kb upstream 5.0kb upstream 5000 false A08: 1419348-1424347 Brassica rapa FPsc
Brara.H00160 5.0kb downstream 5.0kb downstream 5886 true A08: 1413462-1419347 Brassica rapa FPsc
Brara.H00160 5.0kb downstream 5.0kb downstream 5000 false A08: 1413462-1418461 Brassica rapa FPsc
Brara.H00160 10.0kb upstream 10.0kb upstream 10886 true A08: 1418462-1429347 Brassica rapa FPsc
Brara.H00160 10.0kb upstream 10.0kb upstream 10000 false A08: 1419348-1429347 Brassica rapa FPsc
Brara.H00160 10.0kb downstream 10.0kb downstream 10886 true A08: 1408462-1419347 Brassica rapa FPsc
Brara.H00160 10.0kb downstream 10.0kb downstream 10000 false A08: 1408462-1418461 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377335 5261 Brassicaceae View MSA
123837740 5264 Brassicales-Malvales View MSA
124322348 5266 SBM View MSA
124248303 5268 Malvidae View MSA
124063227 5270 Rosid View MSA
123749202 5271 Pentapetalae View MSA
122796678 5272 Eudicot View MSA
122050999 5273 Angiosperm View MSA
121350297 5274 Embryophyte View MSA
123428296 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier