Gene : Brara.B00286 B. rapa FPsc v1.3
Defline:  (1 of 3) 2.8.1.8 - Lipoyl synthase / Lipoate synthase Genomic Order:  286
Name:  ? Brara.B00286 Secondary Identifier:  ? PAC:30609840
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY0-501 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.B00286 0.5kb upstream 0.5kb upstream 3019 true A02: 1356984-1360002 Brassica rapa FPsc
Brara.B00286 0.5kb upstream 0.5kb upstream 500 false A02: 1359503-1360002 Brassica rapa FPsc
Brara.B00286 0.5kb downstream 0.5kb downstream 3019 true A02: 1356484-1359502 Brassica rapa FPsc
Brara.B00286 0.5kb downstream 0.5kb downstream 500 false A02: 1356484-1356983 Brassica rapa FPsc
Brara.B00286 1.0kb upstream 1.0kb upstream 3519 true A02: 1356984-1360502 Brassica rapa FPsc
Brara.B00286 1.0kb upstream 1.0kb upstream 1000 false A02: 1359503-1360502 Brassica rapa FPsc
Brara.B00286 1.0kb downstream 1.0kb downstream 3519 true A02: 1355984-1359502 Brassica rapa FPsc
Brara.B00286 1.0kb downstream 1.0kb downstream 1000 false A02: 1355984-1356983 Brassica rapa FPsc
Brara.B00286 2.0kb upstream 2.0kb upstream 4519 true A02: 1356984-1361502 Brassica rapa FPsc
Brara.B00286 2.0kb upstream 2.0kb upstream 2000 false A02: 1359503-1361502 Brassica rapa FPsc
Brara.B00286 2.0kb downstream 2.0kb downstream 4519 true A02: 1354984-1359502 Brassica rapa FPsc
Brara.B00286 2.0kb downstream 2.0kb downstream 2000 false A02: 1354984-1356983 Brassica rapa FPsc
Brara.B00286 5.0kb upstream 5.0kb upstream 7519 true A02: 1356984-1364502 Brassica rapa FPsc
Brara.B00286 5.0kb upstream 5.0kb upstream 5000 false A02: 1359503-1364502 Brassica rapa FPsc
Brara.B00286 5.0kb downstream 5.0kb downstream 7519 true A02: 1351984-1359502 Brassica rapa FPsc
Brara.B00286 5.0kb downstream 5.0kb downstream 5000 false A02: 1351984-1356983 Brassica rapa FPsc
Brara.B00286 10.0kb upstream 10.0kb upstream 12519 true A02: 1356984-1369502 Brassica rapa FPsc
Brara.B00286 10.0kb upstream 10.0kb upstream 10000 false A02: 1359503-1369502 Brassica rapa FPsc
Brara.B00286 10.0kb downstream 10.0kb downstream 12519 true A02: 1346984-1359502 Brassica rapa FPsc
Brara.B00286 10.0kb downstream 10.0kb downstream 10000 false A02: 1346984-1356983 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041417 5273 Angiosperm View MSA
122345420 5261 Brassicaceae Singleton cluster - no MSA
123840832 5264 Brassicales-Malvales View MSA
124338504 5266 SBM View MSA
124239973 5268 Malvidae View MSA
124063598 5270 Rosid View MSA
123745953 5271 Pentapetalae View MSA
122793471 5272 Eudicot View MSA
121346374 5274 Embryophyte View MSA
123424868 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier