Gene : Brara.H00167 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR18896//PTHR18896:SF63 - PHOSPHOLIPASE D Genomic Order:  167
Name:  ? Brara.H00167 Secondary Identifier:  ? PAC:30648110
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc LIPASYN-PWY Brassica rapa FPsc pathologic  
BrapaFPsc PWY-3561 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7039 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.H00167 0.5kb upstream 0.5kb upstream 3747 true A08: 1517270-1521016 Brassica rapa FPsc
Brara.H00167 0.5kb upstream 0.5kb upstream 500 false A08: 1517270-1517769 Brassica rapa FPsc
Brara.H00167 0.5kb downstream 0.5kb downstream 3747 true A08: 1517770-1521516 Brassica rapa FPsc
Brara.H00167 0.5kb downstream 0.5kb downstream 500 false A08: 1521017-1521516 Brassica rapa FPsc
Brara.H00167 1.0kb upstream 1.0kb upstream 4247 true A08: 1516770-1521016 Brassica rapa FPsc
Brara.H00167 1.0kb upstream 1.0kb upstream 1000 false A08: 1516770-1517769 Brassica rapa FPsc
Brara.H00167 1.0kb downstream 1.0kb downstream 4247 true A08: 1517770-1522016 Brassica rapa FPsc
Brara.H00167 1.0kb downstream 1.0kb downstream 1000 false A08: 1521017-1522016 Brassica rapa FPsc
Brara.H00167 2.0kb upstream 2.0kb upstream 5247 true A08: 1515770-1521016 Brassica rapa FPsc
Brara.H00167 2.0kb upstream 2.0kb upstream 2000 false A08: 1515770-1517769 Brassica rapa FPsc
Brara.H00167 2.0kb downstream 2.0kb downstream 5247 true A08: 1517770-1523016 Brassica rapa FPsc
Brara.H00167 2.0kb downstream 2.0kb downstream 2000 false A08: 1521017-1523016 Brassica rapa FPsc
Brara.H00167 5.0kb upstream 5.0kb upstream 8247 true A08: 1512770-1521016 Brassica rapa FPsc
Brara.H00167 5.0kb upstream 5.0kb upstream 5000 false A08: 1512770-1517769 Brassica rapa FPsc
Brara.H00167 5.0kb downstream 5.0kb downstream 8247 true A08: 1517770-1526016 Brassica rapa FPsc
Brara.H00167 5.0kb downstream 5.0kb downstream 5000 false A08: 1521017-1526016 Brassica rapa FPsc
Brara.H00167 10.0kb upstream 10.0kb upstream 13247 true A08: 1507770-1521016 Brassica rapa FPsc
Brara.H00167 10.0kb upstream 10.0kb upstream 10000 false A08: 1507770-1517769 Brassica rapa FPsc
Brara.H00167 10.0kb downstream 10.0kb downstream 13247 true A08: 1517770-1531016 Brassica rapa FPsc
Brara.H00167 10.0kb downstream 10.0kb downstream 10000 false A08: 1521017-1531016 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121507987 5273 Angiosperm View MSA
122356349 5261 Brassicaceae View MSA
123794476 5264 Brassicales-Malvales View MSA
124292282 5266 SBM View MSA
124145075 5268 Malvidae View MSA
123871522 5270 Rosid View MSA
123455745 5271 Pentapetalae View MSA
122491178 5272 Eudicot View MSA
120781127 5274 Embryophyte View MSA
122823187 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier