Gene : Brara.D02534 B. rapa FPsc v1.3
Defline:  (1 of 4) PTHR24093:SF296 - CALCIUM-TRANSPORTING ATPASE 4, PLASMA MEMBRANE-TYPE-RELATED Genomic Order:  2534
Name:  ? Brara.D02534 Secondary Identifier:  ? PAC:30621884
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.D02534 0.5kb upstream 0.5kb upstream 6150 true A04: 19815436-19821585 Brassica rapa FPsc
Brara.D02534 0.5kb upstream 0.5kb upstream 500 false A04: 19821086-19821585 Brassica rapa FPsc
Brara.D02534 0.5kb downstream 0.5kb downstream 6150 true A04: 19814936-19821085 Brassica rapa FPsc
Brara.D02534 0.5kb downstream 0.5kb downstream 500 false A04: 19814936-19815435 Brassica rapa FPsc
Brara.D02534 1.0kb upstream 1.0kb upstream 6650 true A04: 19815436-19822085 Brassica rapa FPsc
Brara.D02534 1.0kb upstream 1.0kb upstream 1000 false A04: 19821086-19822085 Brassica rapa FPsc
Brara.D02534 1.0kb downstream 1.0kb downstream 6650 true A04: 19814436-19821085 Brassica rapa FPsc
Brara.D02534 1.0kb downstream 1.0kb downstream 1000 false A04: 19814436-19815435 Brassica rapa FPsc
Brara.D02534 2.0kb upstream 2.0kb upstream 7650 true A04: 19815436-19823085 Brassica rapa FPsc
Brara.D02534 2.0kb upstream 2.0kb upstream 2000 false A04: 19821086-19823085 Brassica rapa FPsc
Brara.D02534 2.0kb downstream 2.0kb downstream 7650 true A04: 19813436-19821085 Brassica rapa FPsc
Brara.D02534 2.0kb downstream 2.0kb downstream 2000 false A04: 19813436-19815435 Brassica rapa FPsc
Brara.D02534 5.0kb upstream 5.0kb upstream 10650 true A04: 19815436-19826085 Brassica rapa FPsc
Brara.D02534 5.0kb upstream 5.0kb upstream 5000 false A04: 19821086-19826085 Brassica rapa FPsc
Brara.D02534 5.0kb downstream 5.0kb downstream 10650 true A04: 19810436-19821085 Brassica rapa FPsc
Brara.D02534 5.0kb downstream 5.0kb downstream 5000 false A04: 19810436-19815435 Brassica rapa FPsc
Brara.D02534 10.0kb upstream 10.0kb upstream 15650 true A04: 19815436-19831085 Brassica rapa FPsc
Brara.D02534 10.0kb upstream 10.0kb upstream 10000 false A04: 19821086-19831085 Brassica rapa FPsc
Brara.D02534 10.0kb downstream 10.0kb downstream 15650 true A04: 19805436-19821085 Brassica rapa FPsc
Brara.D02534 10.0kb downstream 10.0kb downstream 10000 false A04: 19805436-19815435 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362379 5261 Brassicaceae View MSA
123835352 5264 Brassicales-Malvales View MSA
124349440 5266 SBM View MSA
124244761 5268 Malvidae View MSA
124070043 5270 Rosid View MSA
123738336 5271 Pentapetalae View MSA
122786540 5272 Eudicot View MSA
122043191 5273 Angiosperm View MSA
121349207 5274 Embryophyte View MSA
123428805 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier