Gene : Brara.H00215 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR23249:SF16 - TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 1 Genomic Order:  215
Name:  ? Brara.H00215 Secondary Identifier:  ? PAC:30650003
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.H00215 0.5kb upstream 0.5kb upstream 2381 true A08: 1927766-1930146 Brassica rapa FPsc
Brara.H00215 0.5kb upstream 0.5kb upstream 500 false A08: 1929647-1930146 Brassica rapa FPsc
Brara.H00215 0.5kb downstream 0.5kb downstream 2381 true A08: 1927266-1929646 Brassica rapa FPsc
Brara.H00215 0.5kb downstream 0.5kb downstream 500 false A08: 1927266-1927765 Brassica rapa FPsc
Brara.H00215 1.0kb upstream 1.0kb upstream 2881 true A08: 1927766-1930646 Brassica rapa FPsc
Brara.H00215 1.0kb upstream 1.0kb upstream 1000 false A08: 1929647-1930646 Brassica rapa FPsc
Brara.H00215 1.0kb downstream 1.0kb downstream 2881 true A08: 1926766-1929646 Brassica rapa FPsc
Brara.H00215 1.0kb downstream 1.0kb downstream 1000 false A08: 1926766-1927765 Brassica rapa FPsc
Brara.H00215 2.0kb upstream 2.0kb upstream 3881 true A08: 1927766-1931646 Brassica rapa FPsc
Brara.H00215 2.0kb upstream 2.0kb upstream 2000 false A08: 1929647-1931646 Brassica rapa FPsc
Brara.H00215 2.0kb downstream 2.0kb downstream 3881 true A08: 1925766-1929646 Brassica rapa FPsc
Brara.H00215 2.0kb downstream 2.0kb downstream 2000 false A08: 1925766-1927765 Brassica rapa FPsc
Brara.H00215 5.0kb upstream 5.0kb upstream 6881 true A08: 1927766-1934646 Brassica rapa FPsc
Brara.H00215 5.0kb upstream 5.0kb upstream 5000 false A08: 1929647-1934646 Brassica rapa FPsc
Brara.H00215 5.0kb downstream 5.0kb downstream 6881 true A08: 1922766-1929646 Brassica rapa FPsc
Brara.H00215 5.0kb downstream 5.0kb downstream 5000 false A08: 1922766-1927765 Brassica rapa FPsc
Brara.H00215 10.0kb upstream 10.0kb upstream 11881 true A08: 1927766-1939646 Brassica rapa FPsc
Brara.H00215 10.0kb upstream 10.0kb upstream 10000 false A08: 1929647-1939646 Brassica rapa FPsc
Brara.H00215 10.0kb downstream 10.0kb downstream 11881 true A08: 1917766-1929646 Brassica rapa FPsc
Brara.H00215 10.0kb downstream 10.0kb downstream 10000 false A08: 1917766-1927765 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026490 5273 Angiosperm View MSA
122355689 5261 Brassicaceae Singleton cluster - no MSA
123793891 5264 Brassicales-Malvales Singleton cluster - no MSA
124291715 5266 SBM Singleton cluster - no MSA
124144616 5268 Malvidae Singleton cluster - no MSA
123871137 5270 Rosid Singleton cluster - no MSA
123752439 5271 Pentapetalae View MSA
122794769 5272 Eudicot View MSA
121344291 5274 Embryophyte View MSA
123427363 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier