Gene : Brara.H00229 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR11206:SF128 - MATE EFFLUX FAMILY PROTEIN 1 Genomic Order:  229
Name:  ? Brara.H00229 Secondary Identifier:  ? PAC:30649031
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.H00229 0.5kb upstream 0.5kb upstream 3407 true A08: 2057982-2061388 Brassica rapa FPsc
Brara.H00229 0.5kb upstream 0.5kb upstream 500 false A08: 2057982-2058481 Brassica rapa FPsc
Brara.H00229 0.5kb downstream 0.5kb downstream 3407 true A08: 2058482-2061888 Brassica rapa FPsc
Brara.H00229 0.5kb downstream 0.5kb downstream 500 false A08: 2061389-2061888 Brassica rapa FPsc
Brara.H00229 1.0kb upstream 1.0kb upstream 3907 true A08: 2057482-2061388 Brassica rapa FPsc
Brara.H00229 1.0kb upstream 1.0kb upstream 1000 false A08: 2057482-2058481 Brassica rapa FPsc
Brara.H00229 1.0kb downstream 1.0kb downstream 3907 true A08: 2058482-2062388 Brassica rapa FPsc
Brara.H00229 1.0kb downstream 1.0kb downstream 1000 false A08: 2061389-2062388 Brassica rapa FPsc
Brara.H00229 2.0kb upstream 2.0kb upstream 4907 true A08: 2056482-2061388 Brassica rapa FPsc
Brara.H00229 2.0kb upstream 2.0kb upstream 2000 false A08: 2056482-2058481 Brassica rapa FPsc
Brara.H00229 2.0kb downstream 2.0kb downstream 4907 true A08: 2058482-2063388 Brassica rapa FPsc
Brara.H00229 2.0kb downstream 2.0kb downstream 2000 false A08: 2061389-2063388 Brassica rapa FPsc
Brara.H00229 5.0kb upstream 5.0kb upstream 7907 true A08: 2053482-2061388 Brassica rapa FPsc
Brara.H00229 5.0kb upstream 5.0kb upstream 5000 false A08: 2053482-2058481 Brassica rapa FPsc
Brara.H00229 5.0kb downstream 5.0kb downstream 7907 true A08: 2058482-2066388 Brassica rapa FPsc
Brara.H00229 5.0kb downstream 5.0kb downstream 5000 false A08: 2061389-2066388 Brassica rapa FPsc
Brara.H00229 10.0kb upstream 10.0kb upstream 12907 true A08: 2048482-2061388 Brassica rapa FPsc
Brara.H00229 10.0kb upstream 10.0kb upstream 10000 false A08: 2048482-2058481 Brassica rapa FPsc
Brara.H00229 10.0kb downstream 10.0kb downstream 12907 true A08: 2058482-2071388 Brassica rapa FPsc
Brara.H00229 10.0kb downstream 10.0kb downstream 10000 false A08: 2061389-2071388 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366842 5261 Brassicaceae View MSA
123832811 5264 Brassicales-Malvales View MSA
124341338 5266 SBM View MSA
124248353 5268 Malvidae View MSA
124072116 5270 Rosid View MSA
123753087 5271 Pentapetalae View MSA
122795715 5272 Eudicot View MSA
122045174 5273 Angiosperm View MSA
121348626 5274 Embryophyte View MSA
123428603 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier