Gene : Brara.H01075 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR13763:SF1 - PROTEIN BREAST CANCER SUSCEPTIBILITY 1 HOMOLOG Genomic Order:  1075
Name:  ? Brara.H01075 Secondary Identifier:  ? PAC:30647443
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-7511 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.H01075 0.5kb upstream 0.5kb upstream 5112 true A08: 12537348-12542459 Brassica rapa FPsc
Brara.H01075 0.5kb upstream 0.5kb upstream 500 false A08: 12541960-12542459 Brassica rapa FPsc
Brara.H01075 0.5kb downstream 0.5kb downstream 5112 true A08: 12536848-12541959 Brassica rapa FPsc
Brara.H01075 0.5kb downstream 0.5kb downstream 500 false A08: 12536848-12537347 Brassica rapa FPsc
Brara.H01075 1.0kb upstream 1.0kb upstream 5612 true A08: 12537348-12542959 Brassica rapa FPsc
Brara.H01075 1.0kb upstream 1.0kb upstream 1000 false A08: 12541960-12542959 Brassica rapa FPsc
Brara.H01075 1.0kb downstream 1.0kb downstream 5612 true A08: 12536348-12541959 Brassica rapa FPsc
Brara.H01075 1.0kb downstream 1.0kb downstream 1000 false A08: 12536348-12537347 Brassica rapa FPsc
Brara.H01075 2.0kb upstream 2.0kb upstream 6612 true A08: 12537348-12543959 Brassica rapa FPsc
Brara.H01075 2.0kb upstream 2.0kb upstream 2000 false A08: 12541960-12543959 Brassica rapa FPsc
Brara.H01075 2.0kb downstream 2.0kb downstream 6612 true A08: 12535348-12541959 Brassica rapa FPsc
Brara.H01075 2.0kb downstream 2.0kb downstream 2000 false A08: 12535348-12537347 Brassica rapa FPsc
Brara.H01075 5.0kb upstream 5.0kb upstream 9612 true A08: 12537348-12546959 Brassica rapa FPsc
Brara.H01075 5.0kb upstream 5.0kb upstream 5000 false A08: 12541960-12546959 Brassica rapa FPsc
Brara.H01075 5.0kb downstream 5.0kb downstream 9612 true A08: 12532348-12541959 Brassica rapa FPsc
Brara.H01075 5.0kb downstream 5.0kb downstream 5000 false A08: 12532348-12537347 Brassica rapa FPsc
Brara.H01075 10.0kb upstream 10.0kb upstream 14612 true A08: 12537348-12551959 Brassica rapa FPsc
Brara.H01075 10.0kb upstream 10.0kb upstream 10000 false A08: 12541960-12551959 Brassica rapa FPsc
Brara.H01075 10.0kb downstream 10.0kb downstream 14612 true A08: 12527348-12541959 Brassica rapa FPsc
Brara.H01075 10.0kb downstream 10.0kb downstream 10000 false A08: 12527348-12537347 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374369 5261 Brassicaceae View MSA
123828360 5264 Brassicales-Malvales View MSA
124321529 5266 SBM View MSA
124252293 5268 Malvidae View MSA
124069553 5270 Rosid View MSA
123745741 5271 Pentapetalae View MSA
122790490 5272 Eudicot View MSA
122049651 5273 Angiosperm View MSA
121346797 5274 Embryophyte View MSA
123380447 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier