Gene : Brara.H00050 B. rapa FPsc v1.3
Defline:  (1 of 9) PTHR22763:SF59 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MRP15 Genomic Order:  50
Name:  ? Brara.H00050 Secondary Identifier:  ? PAC:30648014
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-7511 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.H00050 0.5kb upstream 0.5kb upstream 2187 true A08: 399805-401991 Brassica rapa FPsc
Brara.H00050 0.5kb upstream 0.5kb upstream 500 false A08: 399805-400304 Brassica rapa FPsc
Brara.H00050 0.5kb downstream 0.5kb downstream 2187 true A08: 400305-402491 Brassica rapa FPsc
Brara.H00050 0.5kb downstream 0.5kb downstream 500 false A08: 401992-402491 Brassica rapa FPsc
Brara.H00050 1.0kb upstream 1.0kb upstream 2687 true A08: 399305-401991 Brassica rapa FPsc
Brara.H00050 1.0kb upstream 1.0kb upstream 1000 false A08: 399305-400304 Brassica rapa FPsc
Brara.H00050 1.0kb downstream 1.0kb downstream 2687 true A08: 400305-402991 Brassica rapa FPsc
Brara.H00050 1.0kb downstream 1.0kb downstream 1000 false A08: 401992-402991 Brassica rapa FPsc
Brara.H00050 2.0kb upstream 2.0kb upstream 3687 true A08: 398305-401991 Brassica rapa FPsc
Brara.H00050 2.0kb upstream 2.0kb upstream 2000 false A08: 398305-400304 Brassica rapa FPsc
Brara.H00050 2.0kb downstream 2.0kb downstream 3687 true A08: 400305-403991 Brassica rapa FPsc
Brara.H00050 2.0kb downstream 2.0kb downstream 2000 false A08: 401992-403991 Brassica rapa FPsc
Brara.H00050 5.0kb upstream 5.0kb upstream 6687 true A08: 395305-401991 Brassica rapa FPsc
Brara.H00050 5.0kb upstream 5.0kb upstream 5000 false A08: 395305-400304 Brassica rapa FPsc
Brara.H00050 5.0kb downstream 5.0kb downstream 6687 true A08: 400305-406991 Brassica rapa FPsc
Brara.H00050 5.0kb downstream 5.0kb downstream 5000 false A08: 401992-406991 Brassica rapa FPsc
Brara.H00050 10.0kb upstream 10.0kb upstream 11687 true A08: 390305-401991 Brassica rapa FPsc
Brara.H00050 10.0kb upstream 10.0kb upstream 10000 false A08: 390305-400304 Brassica rapa FPsc
Brara.H00050 10.0kb downstream 10.0kb downstream 11687 true A08: 400305-411991 Brassica rapa FPsc
Brara.H00050 10.0kb downstream 10.0kb downstream 10000 false A08: 401992-411991 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122355105 5261 Brassicaceae Singleton cluster - no MSA
123842355 5264 Brassicales-Malvales View MSA
124323424 5266 SBM View MSA
124169462 5268 Malvidae View MSA
123892428 5270 Rosid View MSA
123753393 5271 Pentapetalae View MSA
122788391 5272 Eudicot View MSA
122050385 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121349521 5274 Embryophyte View MSA

0 Rna Seq Expressions

1 Strain

DB identifier