Gene : Brara.B00146 B. rapa FPsc v1.3
Defline:  (1 of 3) 3.1.3.64 - Phosphatidylinositol-3-phosphatase / Phosphatidyl-3-phosphate 3-phosphohydrolase Genomic Order:  146
Name:  ? Brara.B00146 Secondary Identifier:  ? PAC:30607705
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-6367 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-6368 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.B00146 0.5kb upstream 0.5kb upstream 5762 true A02: 721771-727532 Brassica rapa FPsc
Brara.B00146 0.5kb upstream 0.5kb upstream 500 false A02: 727033-727532 Brassica rapa FPsc
Brara.B00146 0.5kb downstream 0.5kb downstream 5762 true A02: 721271-727032 Brassica rapa FPsc
Brara.B00146 0.5kb downstream 0.5kb downstream 500 false A02: 721271-721770 Brassica rapa FPsc
Brara.B00146 1.0kb upstream 1.0kb upstream 6262 true A02: 721771-728032 Brassica rapa FPsc
Brara.B00146 1.0kb upstream 1.0kb upstream 1000 false A02: 727033-728032 Brassica rapa FPsc
Brara.B00146 1.0kb downstream 1.0kb downstream 6262 true A02: 720771-727032 Brassica rapa FPsc
Brara.B00146 1.0kb downstream 1.0kb downstream 1000 false A02: 720771-721770 Brassica rapa FPsc
Brara.B00146 2.0kb upstream 2.0kb upstream 7262 true A02: 721771-729032 Brassica rapa FPsc
Brara.B00146 2.0kb upstream 2.0kb upstream 2000 false A02: 727033-729032 Brassica rapa FPsc
Brara.B00146 2.0kb downstream 2.0kb downstream 7262 true A02: 719771-727032 Brassica rapa FPsc
Brara.B00146 2.0kb downstream 2.0kb downstream 2000 false A02: 719771-721770 Brassica rapa FPsc
Brara.B00146 5.0kb upstream 5.0kb upstream 10262 true A02: 721771-732032 Brassica rapa FPsc
Brara.B00146 5.0kb upstream 5.0kb upstream 5000 false A02: 727033-732032 Brassica rapa FPsc
Brara.B00146 5.0kb downstream 5.0kb downstream 10262 true A02: 716771-727032 Brassica rapa FPsc
Brara.B00146 5.0kb downstream 5.0kb downstream 5000 false A02: 716771-721770 Brassica rapa FPsc
Brara.B00146 10.0kb upstream 10.0kb upstream 15262 true A02: 721771-737032 Brassica rapa FPsc
Brara.B00146 10.0kb upstream 10.0kb upstream 10000 false A02: 727033-737032 Brassica rapa FPsc
Brara.B00146 10.0kb downstream 10.0kb downstream 15262 true A02: 711771-727032 Brassica rapa FPsc
Brara.B00146 10.0kb downstream 10.0kb downstream 10000 false A02: 711771-721770 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121503265 5273 Angiosperm Singleton cluster - no MSA
122344742 5261 Brassicaceae Singleton cluster - no MSA
123784698 5264 Brassicales-Malvales Singleton cluster - no MSA
124282864 5266 SBM Singleton cluster - no MSA
124137376 5268 Malvidae Singleton cluster - no MSA
123865096 5270 Rosid Singleton cluster - no MSA
123450327 5271 Pentapetalae Singleton cluster - no MSA
122485851 5272 Eudicot Singleton cluster - no MSA
120776557 5274 Embryophyte Singleton cluster - no MSA
122818825 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

1 Strain

DB identifier