Gene : Brara.B00165 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR13301//PTHR13301:SF64 - X-BOX TRANSCRIPTION FACTOR-RELATED Genomic Order:  165
Name:  ? Brara.B00165 Secondary Identifier:  ? PAC:30610983
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-1001 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.B00165 0.5kb upstream 0.5kb upstream 5470 true A02: 795307-800776 Brassica rapa FPsc
Brara.B00165 0.5kb upstream 0.5kb upstream 500 false A02: 800277-800776 Brassica rapa FPsc
Brara.B00165 0.5kb downstream 0.5kb downstream 5470 true A02: 794807-800276 Brassica rapa FPsc
Brara.B00165 0.5kb downstream 0.5kb downstream 500 false A02: 794807-795306 Brassica rapa FPsc
Brara.B00165 1.0kb upstream 1.0kb upstream 5970 true A02: 795307-801276 Brassica rapa FPsc
Brara.B00165 1.0kb upstream 1.0kb upstream 1000 false A02: 800277-801276 Brassica rapa FPsc
Brara.B00165 1.0kb downstream 1.0kb downstream 5970 true A02: 794307-800276 Brassica rapa FPsc
Brara.B00165 1.0kb downstream 1.0kb downstream 1000 false A02: 794307-795306 Brassica rapa FPsc
Brara.B00165 2.0kb upstream 2.0kb upstream 6970 true A02: 795307-802276 Brassica rapa FPsc
Brara.B00165 2.0kb upstream 2.0kb upstream 2000 false A02: 800277-802276 Brassica rapa FPsc
Brara.B00165 2.0kb downstream 2.0kb downstream 6970 true A02: 793307-800276 Brassica rapa FPsc
Brara.B00165 2.0kb downstream 2.0kb downstream 2000 false A02: 793307-795306 Brassica rapa FPsc
Brara.B00165 5.0kb upstream 5.0kb upstream 9970 true A02: 795307-805276 Brassica rapa FPsc
Brara.B00165 5.0kb upstream 5.0kb upstream 5000 false A02: 800277-805276 Brassica rapa FPsc
Brara.B00165 5.0kb downstream 5.0kb downstream 9970 true A02: 790307-800276 Brassica rapa FPsc
Brara.B00165 5.0kb downstream 5.0kb downstream 5000 false A02: 790307-795306 Brassica rapa FPsc
Brara.B00165 10.0kb upstream 10.0kb upstream 14970 true A02: 795307-810276 Brassica rapa FPsc
Brara.B00165 10.0kb upstream 10.0kb upstream 10000 false A02: 800277-810276 Brassica rapa FPsc
Brara.B00165 10.0kb downstream 10.0kb downstream 14970 true A02: 785307-800276 Brassica rapa FPsc
Brara.B00165 10.0kb downstream 10.0kb downstream 10000 false A02: 785307-795306 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366565 5261 Brassicaceae View MSA
123829715 5264 Brassicales-Malvales View MSA
124350218 5266 SBM View MSA
124240162 5268 Malvidae View MSA
124068602 5270 Rosid View MSA
123746424 5271 Pentapetalae View MSA
122793475 5272 Eudicot View MSA
122046929 5273 Angiosperm View MSA
121351501 5274 Embryophyte View MSA
123382193 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier