Gene : Brara.G03728 B. rapa FPsc v1.3
Defline:  (1 of 3) 1.1.5.3 - Glycerol-3-phosphate dehydrogenase / sn-glycerol-3-phosphate dehydrogenase Genomic Order:  3728
Name:  ? Brara.G03728 Secondary Identifier:  ? PAC:30634470
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-4261 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-6118 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.G03728 0.5kb upstream 0.5kb upstream 2986 true A07: 27327953-27330938 Brassica rapa FPsc
Brara.G03728 0.5kb upstream 0.5kb upstream 500 false A07: 27330439-27330938 Brassica rapa FPsc
Brara.G03728 0.5kb downstream 0.5kb downstream 2986 true A07: 27327453-27330438 Brassica rapa FPsc
Brara.G03728 0.5kb downstream 0.5kb downstream 500 false A07: 27327453-27327952 Brassica rapa FPsc
Brara.G03728 1.0kb upstream 1.0kb upstream 3486 true A07: 27327953-27331438 Brassica rapa FPsc
Brara.G03728 1.0kb upstream 1.0kb upstream 1000 false A07: 27330439-27331438 Brassica rapa FPsc
Brara.G03728 1.0kb downstream 1.0kb downstream 3486 true A07: 27326953-27330438 Brassica rapa FPsc
Brara.G03728 1.0kb downstream 1.0kb downstream 1000 false A07: 27326953-27327952 Brassica rapa FPsc
Brara.G03728 2.0kb upstream 2.0kb upstream 4486 true A07: 27327953-27332438 Brassica rapa FPsc
Brara.G03728 2.0kb upstream 2.0kb upstream 2000 false A07: 27330439-27332438 Brassica rapa FPsc
Brara.G03728 2.0kb downstream 2.0kb downstream 4486 true A07: 27325953-27330438 Brassica rapa FPsc
Brara.G03728 2.0kb downstream 2.0kb downstream 2000 false A07: 27325953-27327952 Brassica rapa FPsc
Brara.G03728 5.0kb upstream 5.0kb upstream 7486 true A07: 27327953-27335438 Brassica rapa FPsc
Brara.G03728 5.0kb upstream 5.0kb upstream 5000 false A07: 27330439-27335438 Brassica rapa FPsc
Brara.G03728 5.0kb downstream 5.0kb downstream 7486 true A07: 27322953-27330438 Brassica rapa FPsc
Brara.G03728 5.0kb downstream 5.0kb downstream 5000 false A07: 27322953-27327952 Brassica rapa FPsc
Brara.G03728 10.0kb upstream 10.0kb upstream 12486 true A07: 27327953-27340438 Brassica rapa FPsc
Brara.G03728 10.0kb upstream 10.0kb upstream 10000 false A07: 27330439-27340438 Brassica rapa FPsc
Brara.G03728 10.0kb downstream 10.0kb downstream 12486 true A07: 27317953-27330438 Brassica rapa FPsc
Brara.G03728 10.0kb downstream 10.0kb downstream 10000 false A07: 27317953-27327952 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121506080 5273 Angiosperm Singleton cluster - no MSA
122351684 5261 Brassicaceae Singleton cluster - no MSA
123790535 5264 Brassicales-Malvales Singleton cluster - no MSA
124288483 5266 SBM Singleton cluster - no MSA
124141992 5268 Malvidae Singleton cluster - no MSA
123868956 5270 Rosid Singleton cluster - no MSA
123453587 5271 Pentapetalae Singleton cluster - no MSA
122489049 5272 Eudicot Singleton cluster - no MSA
120779278 5274 Embryophyte Singleton cluster - no MSA
123427532 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier