Gene : Brara.H00338 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR12947:SF10 - AMSH-LIKE UBIQUITIN THIOESTERASE 1 Genomic Order:  338
Name:  ? Brara.H00338 Secondary Identifier:  ? PAC:30648207
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.H00338 0.5kb upstream 0.5kb upstream 3617 true A08: 3155082-3158698 Brassica rapa FPsc
Brara.H00338 0.5kb upstream 0.5kb upstream 500 false A08: 3155082-3155581 Brassica rapa FPsc
Brara.H00338 0.5kb downstream 0.5kb downstream 3617 true A08: 3155582-3159198 Brassica rapa FPsc
Brara.H00338 0.5kb downstream 0.5kb downstream 500 false A08: 3158699-3159198 Brassica rapa FPsc
Brara.H00338 1.0kb upstream 1.0kb upstream 4117 true A08: 3154582-3158698 Brassica rapa FPsc
Brara.H00338 1.0kb upstream 1.0kb upstream 1000 false A08: 3154582-3155581 Brassica rapa FPsc
Brara.H00338 1.0kb downstream 1.0kb downstream 4117 true A08: 3155582-3159698 Brassica rapa FPsc
Brara.H00338 1.0kb downstream 1.0kb downstream 1000 false A08: 3158699-3159698 Brassica rapa FPsc
Brara.H00338 2.0kb upstream 2.0kb upstream 5117 true A08: 3153582-3158698 Brassica rapa FPsc
Brara.H00338 2.0kb upstream 2.0kb upstream 2000 false A08: 3153582-3155581 Brassica rapa FPsc
Brara.H00338 2.0kb downstream 2.0kb downstream 5117 true A08: 3155582-3160698 Brassica rapa FPsc
Brara.H00338 2.0kb downstream 2.0kb downstream 2000 false A08: 3158699-3160698 Brassica rapa FPsc
Brara.H00338 5.0kb upstream 5.0kb upstream 8117 true A08: 3150582-3158698 Brassica rapa FPsc
Brara.H00338 5.0kb upstream 5.0kb upstream 5000 false A08: 3150582-3155581 Brassica rapa FPsc
Brara.H00338 5.0kb downstream 5.0kb downstream 8117 true A08: 3155582-3163698 Brassica rapa FPsc
Brara.H00338 5.0kb downstream 5.0kb downstream 5000 false A08: 3158699-3163698 Brassica rapa FPsc
Brara.H00338 10.0kb upstream 10.0kb upstream 13117 true A08: 3145582-3158698 Brassica rapa FPsc
Brara.H00338 10.0kb upstream 10.0kb upstream 10000 false A08: 3145582-3155581 Brassica rapa FPsc
Brara.H00338 10.0kb downstream 10.0kb downstream 13117 true A08: 3155582-3168698 Brassica rapa FPsc
Brara.H00338 10.0kb downstream 10.0kb downstream 10000 false A08: 3158699-3168698 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122355154 5261 Brassicaceae Singleton cluster - no MSA
123793441 5264 Brassicales-Malvales Singleton cluster - no MSA
124291281 5266 SBM Singleton cluster - no MSA
124144259 5268 Malvidae Singleton cluster - no MSA
124064531 5270 Rosid View MSA
123740855 5271 Pentapetalae View MSA
122786605 5272 Eudicot View MSA
122049356 5273 Angiosperm View MSA
121351478 5274 Embryophyte View MSA
123425499 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier