Gene : Brara.G03622 B. rapa FPsc v1.3

Defline:  (1 of 1) PTHR11079:SF74 - RNA PSEUDOURIDYLATE SYNTHASE DOMAIN-CONTAINING PROTEIN 4 Genomic Order:  3622
Name:  ? Brara.G03622 Secondary Identifier:  ? PAC:30635403

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.G03622 0.5kb upstream 0.5kb upstream 3126 true A07: 26863291-26866416 Brassica rapa FPsc
Brara.G03622 0.5kb upstream 0.5kb upstream 500 false A07: 26863291-26863790 Brassica rapa FPsc
Brara.G03622 0.5kb downstream 0.5kb downstream 3126 true A07: 26863791-26866916 Brassica rapa FPsc
Brara.G03622 0.5kb downstream 0.5kb downstream 500 false A07: 26866417-26866916 Brassica rapa FPsc
Brara.G03622 1.0kb upstream 1.0kb upstream 3626 true A07: 26862791-26866416 Brassica rapa FPsc
Brara.G03622 1.0kb upstream 1.0kb upstream 1000 false A07: 26862791-26863790 Brassica rapa FPsc
Brara.G03622 1.0kb downstream 1.0kb downstream 3626 true A07: 26863791-26867416 Brassica rapa FPsc
Brara.G03622 1.0kb downstream 1.0kb downstream 1000 false A07: 26866417-26867416 Brassica rapa FPsc
Brara.G03622 2.0kb upstream 2.0kb upstream 4626 true A07: 26861791-26866416 Brassica rapa FPsc
Brara.G03622 2.0kb upstream 2.0kb upstream 2000 false A07: 26861791-26863790 Brassica rapa FPsc
Brara.G03622 2.0kb downstream 2.0kb downstream 4626 true A07: 26863791-26868416 Brassica rapa FPsc
Brara.G03622 2.0kb downstream 2.0kb downstream 2000 false A07: 26866417-26868416 Brassica rapa FPsc
Brara.G03622 5.0kb upstream 5.0kb upstream 7626 true A07: 26858791-26866416 Brassica rapa FPsc
Brara.G03622 5.0kb upstream 5.0kb upstream 5000 false A07: 26858791-26863790 Brassica rapa FPsc
Brara.G03622 5.0kb downstream 5.0kb downstream 7626 true A07: 26863791-26871416 Brassica rapa FPsc
Brara.G03622 5.0kb downstream 5.0kb downstream 5000 false A07: 26866417-26871416 Brassica rapa FPsc
Brara.G03622 10.0kb upstream 10.0kb upstream 12626 true A07: 26853791-26866416 Brassica rapa FPsc
Brara.G03622 10.0kb upstream 10.0kb upstream 10000 false A07: 26853791-26863790 Brassica rapa FPsc
Brara.G03622 10.0kb downstream 10.0kb downstream 12626 true A07: 26863791-26876416 Brassica rapa FPsc
Brara.G03622 10.0kb downstream 10.0kb downstream 10000 false A07: 26866417-26876416 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373260 5261 Brassicaceae View MSA
123827527 5264 Brassicales-Malvales View MSA
124337282 5266 SBM View MSA
124240463 5268 Malvidae View MSA
124068142 5270 Rosid View MSA
123740880 5271 Pentapetalae View MSA
122787515 5272 Eudicot View MSA
122044797 5273 Angiosperm View MSA
121348863 5274 Embryophyte View MSA
123426669 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier