Gene : Brara.G03627 B. rapa FPsc v1.3
Defline:  (1 of 3) PTHR31642:SF6 - HXXXD-TYPE ACYL-TRANSFERASE-RELATED Genomic Order:  3627
Name:  ? Brara.G03627 Secondary Identifier:  ? PAC:30635652
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-4203 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5835 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-6801 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.G03627 0.5kb upstream 0.5kb upstream 3401 true A07: 26900694-26904094 Brassica rapa FPsc
Brara.G03627 0.5kb upstream 0.5kb upstream 500 false A07: 26903595-26904094 Brassica rapa FPsc
Brara.G03627 0.5kb downstream 0.5kb downstream 3401 true A07: 26900194-26903594 Brassica rapa FPsc
Brara.G03627 0.5kb downstream 0.5kb downstream 500 false A07: 26900194-26900693 Brassica rapa FPsc
Brara.G03627 1.0kb upstream 1.0kb upstream 3901 true A07: 26900694-26904594 Brassica rapa FPsc
Brara.G03627 1.0kb upstream 1.0kb upstream 1000 false A07: 26903595-26904594 Brassica rapa FPsc
Brara.G03627 1.0kb downstream 1.0kb downstream 3901 true A07: 26899694-26903594 Brassica rapa FPsc
Brara.G03627 1.0kb downstream 1.0kb downstream 1000 false A07: 26899694-26900693 Brassica rapa FPsc
Brara.G03627 2.0kb upstream 2.0kb upstream 4901 true A07: 26900694-26905594 Brassica rapa FPsc
Brara.G03627 2.0kb upstream 2.0kb upstream 2000 false A07: 26903595-26905594 Brassica rapa FPsc
Brara.G03627 2.0kb downstream 2.0kb downstream 4901 true A07: 26898694-26903594 Brassica rapa FPsc
Brara.G03627 2.0kb downstream 2.0kb downstream 2000 false A07: 26898694-26900693 Brassica rapa FPsc
Brara.G03627 5.0kb upstream 5.0kb upstream 7901 true A07: 26900694-26908594 Brassica rapa FPsc
Brara.G03627 5.0kb upstream 5.0kb upstream 5000 false A07: 26903595-26908594 Brassica rapa FPsc
Brara.G03627 5.0kb downstream 5.0kb downstream 7901 true A07: 26895694-26903594 Brassica rapa FPsc
Brara.G03627 5.0kb downstream 5.0kb downstream 5000 false A07: 26895694-26900693 Brassica rapa FPsc
Brara.G03627 10.0kb upstream 10.0kb upstream 12901 true A07: 26900694-26913594 Brassica rapa FPsc
Brara.G03627 10.0kb upstream 10.0kb upstream 10000 false A07: 26903595-26913594 Brassica rapa FPsc
Brara.G03627 10.0kb downstream 10.0kb downstream 12901 true A07: 26890694-26903594 Brassica rapa FPsc
Brara.G03627 10.0kb downstream 10.0kb downstream 10000 false A07: 26890694-26900693 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366246 5261 Brassicaceae View MSA
123831825 5264 Brassicales-Malvales View MSA
124349768 5266 SBM View MSA
124247936 5268 Malvidae View MSA
124064469 5270 Rosid View MSA
123743346 5271 Pentapetalae View MSA
122797720 5272 Eudicot View MSA
122051643 5273 Angiosperm View MSA
121350983 5274 Embryophyte View MSA
123428782 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier