Gene : Brara.G03540 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR21297:SF1 - DNA-DIRECTED RNA POLYMERASE II PROTEIN Genomic Order:  3540
Name:  ? Brara.G03540 Secondary Identifier:  ? PAC:30632692
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.G03540 0.5kb upstream 0.5kb upstream 3889 true A07: 26436580-26440468 Brassica rapa FPsc
Brara.G03540 0.5kb upstream 0.5kb upstream 500 false A07: 26436580-26437079 Brassica rapa FPsc
Brara.G03540 0.5kb downstream 0.5kb downstream 3889 true A07: 26437080-26440968 Brassica rapa FPsc
Brara.G03540 0.5kb downstream 0.5kb downstream 500 false A07: 26440469-26440968 Brassica rapa FPsc
Brara.G03540 1.0kb upstream 1.0kb upstream 4389 true A07: 26436080-26440468 Brassica rapa FPsc
Brara.G03540 1.0kb upstream 1.0kb upstream 1000 false A07: 26436080-26437079 Brassica rapa FPsc
Brara.G03540 1.0kb downstream 1.0kb downstream 4389 true A07: 26437080-26441468 Brassica rapa FPsc
Brara.G03540 1.0kb downstream 1.0kb downstream 1000 false A07: 26440469-26441468 Brassica rapa FPsc
Brara.G03540 2.0kb upstream 2.0kb upstream 5389 true A07: 26435080-26440468 Brassica rapa FPsc
Brara.G03540 2.0kb upstream 2.0kb upstream 2000 false A07: 26435080-26437079 Brassica rapa FPsc
Brara.G03540 2.0kb downstream 2.0kb downstream 5389 true A07: 26437080-26442468 Brassica rapa FPsc
Brara.G03540 2.0kb downstream 2.0kb downstream 2000 false A07: 26440469-26442468 Brassica rapa FPsc
Brara.G03540 5.0kb upstream 5.0kb upstream 8389 true A07: 26432080-26440468 Brassica rapa FPsc
Brara.G03540 5.0kb upstream 5.0kb upstream 5000 false A07: 26432080-26437079 Brassica rapa FPsc
Brara.G03540 5.0kb downstream 5.0kb downstream 8389 true A07: 26437080-26445468 Brassica rapa FPsc
Brara.G03540 5.0kb downstream 5.0kb downstream 5000 false A07: 26440469-26445468 Brassica rapa FPsc
Brara.G03540 10.0kb upstream 10.0kb upstream 13389 true A07: 26427080-26440468 Brassica rapa FPsc
Brara.G03540 10.0kb upstream 10.0kb upstream 10000 false A07: 26427080-26437079 Brassica rapa FPsc
Brara.G03540 10.0kb downstream 10.0kb downstream 13389 true A07: 26437080-26450468 Brassica rapa FPsc
Brara.G03540 10.0kb downstream 10.0kb downstream 10000 false A07: 26440469-26450468 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121511102 5273 Angiosperm View MSA
122372331 5261 Brassicaceae View MSA
123800338 5264 Brassicales-Malvales View MSA
124297759 5266 SBM View MSA
124149566 5268 Malvidae View MSA
123875351 5270 Rosid View MSA
123459185 5271 Pentapetalae View MSA
122494580 5272 Eudicot View MSA
120784167 5274 Embryophyte View MSA
122826101 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier