Gene : Brara.G03571 B. rapa FPsc v1.3
Defline:  (1 of 3) PTHR10108:SF899 - PECTIN METHYLTRANSFERASE QUA2-RELATED Genomic Order:  3571
Name:  ? Brara.G03571 Secondary Identifier:  ? PAC:30632574
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.G03571 0.5kb upstream 0.5kb upstream 4180 true A07: 26623760-26627939 Brassica rapa FPsc
Brara.G03571 0.5kb upstream 0.5kb upstream 500 false A07: 26627440-26627939 Brassica rapa FPsc
Brara.G03571 0.5kb downstream 0.5kb downstream 4180 true A07: 26623260-26627439 Brassica rapa FPsc
Brara.G03571 0.5kb downstream 0.5kb downstream 500 false A07: 26623260-26623759 Brassica rapa FPsc
Brara.G03571 1.0kb upstream 1.0kb upstream 4680 true A07: 26623760-26628439 Brassica rapa FPsc
Brara.G03571 1.0kb upstream 1.0kb upstream 1000 false A07: 26627440-26628439 Brassica rapa FPsc
Brara.G03571 1.0kb downstream 1.0kb downstream 4680 true A07: 26622760-26627439 Brassica rapa FPsc
Brara.G03571 1.0kb downstream 1.0kb downstream 1000 false A07: 26622760-26623759 Brassica rapa FPsc
Brara.G03571 2.0kb upstream 2.0kb upstream 5680 true A07: 26623760-26629439 Brassica rapa FPsc
Brara.G03571 2.0kb upstream 2.0kb upstream 2000 false A07: 26627440-26629439 Brassica rapa FPsc
Brara.G03571 2.0kb downstream 2.0kb downstream 5680 true A07: 26621760-26627439 Brassica rapa FPsc
Brara.G03571 2.0kb downstream 2.0kb downstream 2000 false A07: 26621760-26623759 Brassica rapa FPsc
Brara.G03571 5.0kb upstream 5.0kb upstream 8680 true A07: 26623760-26632439 Brassica rapa FPsc
Brara.G03571 5.0kb upstream 5.0kb upstream 5000 false A07: 26627440-26632439 Brassica rapa FPsc
Brara.G03571 5.0kb downstream 5.0kb downstream 8680 true A07: 26618760-26627439 Brassica rapa FPsc
Brara.G03571 5.0kb downstream 5.0kb downstream 5000 false A07: 26618760-26623759 Brassica rapa FPsc
Brara.G03571 10.0kb upstream 10.0kb upstream 13680 true A07: 26623760-26637439 Brassica rapa FPsc
Brara.G03571 10.0kb upstream 10.0kb upstream 10000 false A07: 26627440-26637439 Brassica rapa FPsc
Brara.G03571 10.0kb downstream 10.0kb downstream 13680 true A07: 26613760-26627439 Brassica rapa FPsc
Brara.G03571 10.0kb downstream 10.0kb downstream 10000 false A07: 26613760-26623759 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122351194 5261 Brassicaceae Singleton cluster - no MSA
123790115 5264 Brassicales-Malvales Singleton cluster - no MSA
124288086 5266 SBM Singleton cluster - no MSA
124251321 5268 Malvidae View MSA
124068394 5270 Rosid View MSA
123753010 5271 Pentapetalae View MSA
122796119 5272 Eudicot View MSA
122048389 5273 Angiosperm View MSA
121346192 5274 Embryophyte View MSA
123380346 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier