Gene : Brara.B00089 B. rapa FPsc v1.3
Defline:  (1 of 8) 1.1.1.41 - Isocitrate dehydrogenase (NAD(+)) / Nicotinamide adenine dinucleotide isocitrate dehydrogenase Genomic Order:  89
Name:  ? Brara.B00089 Secondary Identifier:  ? PAC:30610044
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-5464 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5690 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-6549 Brassica rapa FPsc pathologic  

Genomics

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Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.B00089 0.5kb upstream 0.5kb upstream 2708 true A02: 442536-445243 Brassica rapa FPsc
Brara.B00089 0.5kb upstream 0.5kb upstream 500 false A02: 442536-443035 Brassica rapa FPsc
Brara.B00089 0.5kb downstream 0.5kb downstream 2708 true A02: 443036-445743 Brassica rapa FPsc
Brara.B00089 0.5kb downstream 0.5kb downstream 500 false A02: 445244-445743 Brassica rapa FPsc
Brara.B00089 1.0kb upstream 1.0kb upstream 3208 true A02: 442036-445243 Brassica rapa FPsc
Brara.B00089 1.0kb upstream 1.0kb upstream 1000 false A02: 442036-443035 Brassica rapa FPsc
Brara.B00089 1.0kb downstream 1.0kb downstream 3208 true A02: 443036-446243 Brassica rapa FPsc
Brara.B00089 1.0kb downstream 1.0kb downstream 1000 false A02: 445244-446243 Brassica rapa FPsc
Brara.B00089 2.0kb upstream 2.0kb upstream 4208 true A02: 441036-445243 Brassica rapa FPsc
Brara.B00089 2.0kb upstream 2.0kb upstream 2000 false A02: 441036-443035 Brassica rapa FPsc
Brara.B00089 2.0kb downstream 2.0kb downstream 4208 true A02: 443036-447243 Brassica rapa FPsc
Brara.B00089 2.0kb downstream 2.0kb downstream 2000 false A02: 445244-447243 Brassica rapa FPsc
Brara.B00089 5.0kb upstream 5.0kb upstream 7208 true A02: 438036-445243 Brassica rapa FPsc
Brara.B00089 5.0kb upstream 5.0kb upstream 5000 false A02: 438036-443035 Brassica rapa FPsc
Brara.B00089 5.0kb downstream 5.0kb downstream 7208 true A02: 443036-450243 Brassica rapa FPsc
Brara.B00089 5.0kb downstream 5.0kb downstream 5000 false A02: 445244-450243 Brassica rapa FPsc
Brara.B00089 10.0kb upstream 10.0kb upstream 12208 true A02: 433036-445243 Brassica rapa FPsc
Brara.B00089 10.0kb upstream 10.0kb upstream 10000 false A02: 433036-443035 Brassica rapa FPsc
Brara.B00089 10.0kb downstream 10.0kb downstream 12208 true A02: 443036-455243 Brassica rapa FPsc
Brara.B00089 10.0kb downstream 10.0kb downstream 10000 false A02: 445244-455243 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122345489 5261 Brassicaceae Singleton cluster - no MSA
123785332 5264 Brassicales-Malvales Singleton cluster - no MSA
124283479 5266 SBM Singleton cluster - no MSA
124251295 5268 Malvidae View MSA
124066571 5270 Rosid View MSA
123739712 5271 Pentapetalae View MSA
122792664 5272 Eudicot View MSA
122041698 5273 Angiosperm View MSA
121349734 5274 Embryophyte View MSA
123425496 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier