Gene : Brara.G03596 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR20275:SF2 - NADH KINASE Genomic Order:  3596
Name:  ? Brara.G03596 Secondary Identifier:  ? PAC:30634225
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-5083 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.G03596 0.5kb upstream 0.5kb upstream 2486 true A07: 26770938-26773423 Brassica rapa FPsc
Brara.G03596 0.5kb upstream 0.5kb upstream 500 false A07: 26770938-26771437 Brassica rapa FPsc
Brara.G03596 0.5kb downstream 0.5kb downstream 2486 true A07: 26771438-26773923 Brassica rapa FPsc
Brara.G03596 0.5kb downstream 0.5kb downstream 500 false A07: 26773424-26773923 Brassica rapa FPsc
Brara.G03596 1.0kb upstream 1.0kb upstream 2986 true A07: 26770438-26773423 Brassica rapa FPsc
Brara.G03596 1.0kb upstream 1.0kb upstream 1000 false A07: 26770438-26771437 Brassica rapa FPsc
Brara.G03596 1.0kb downstream 1.0kb downstream 2986 true A07: 26771438-26774423 Brassica rapa FPsc
Brara.G03596 1.0kb downstream 1.0kb downstream 1000 false A07: 26773424-26774423 Brassica rapa FPsc
Brara.G03596 2.0kb upstream 2.0kb upstream 3986 true A07: 26769438-26773423 Brassica rapa FPsc
Brara.G03596 2.0kb upstream 2.0kb upstream 2000 false A07: 26769438-26771437 Brassica rapa FPsc
Brara.G03596 2.0kb downstream 2.0kb downstream 3986 true A07: 26771438-26775423 Brassica rapa FPsc
Brara.G03596 2.0kb downstream 2.0kb downstream 2000 false A07: 26773424-26775423 Brassica rapa FPsc
Brara.G03596 5.0kb upstream 5.0kb upstream 6986 true A07: 26766438-26773423 Brassica rapa FPsc
Brara.G03596 5.0kb upstream 5.0kb upstream 5000 false A07: 26766438-26771437 Brassica rapa FPsc
Brara.G03596 5.0kb downstream 5.0kb downstream 6986 true A07: 26771438-26778423 Brassica rapa FPsc
Brara.G03596 5.0kb downstream 5.0kb downstream 5000 false A07: 26773424-26778423 Brassica rapa FPsc
Brara.G03596 10.0kb upstream 10.0kb upstream 11986 true A07: 26761438-26773423 Brassica rapa FPsc
Brara.G03596 10.0kb upstream 10.0kb upstream 10000 false A07: 26761438-26771437 Brassica rapa FPsc
Brara.G03596 10.0kb downstream 10.0kb downstream 11986 true A07: 26771438-26783423 Brassica rapa FPsc
Brara.G03596 10.0kb downstream 10.0kb downstream 10000 false A07: 26773424-26783423 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377787 5261 Brassicaceae View MSA
123831135 5264 Brassicales-Malvales View MSA
124339693 5266 SBM View MSA
124239844 5268 Malvidae View MSA
124067358 5270 Rosid View MSA
123747292 5271 Pentapetalae View MSA
122792371 5272 Eudicot View MSA
122049268 5273 Angiosperm View MSA
121346179 5274 Embryophyte View MSA
123425212 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier