Gene : Brara.G03499 B. rapa FPsc v1.3
Defline:  (1 of 1) PTHR12096 - NUCLEAR PROTEIN SKIP-RELATED Genomic Order:  3499
Name:  ? Brara.G03499 Secondary Identifier:  ? PAC:30633445
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.G03499 0.5kb upstream 0.5kb upstream 2944 true A07: 26220400-26223343 Brassica rapa FPsc
Brara.G03499 0.5kb upstream 0.5kb upstream 500 false A07: 26222844-26223343 Brassica rapa FPsc
Brara.G03499 0.5kb downstream 0.5kb downstream 2944 true A07: 26219900-26222843 Brassica rapa FPsc
Brara.G03499 0.5kb downstream 0.5kb downstream 500 false A07: 26219900-26220399 Brassica rapa FPsc
Brara.G03499 1.0kb upstream 1.0kb upstream 3444 true A07: 26220400-26223843 Brassica rapa FPsc
Brara.G03499 1.0kb upstream 1.0kb upstream 1000 false A07: 26222844-26223843 Brassica rapa FPsc
Brara.G03499 1.0kb downstream 1.0kb downstream 3444 true A07: 26219400-26222843 Brassica rapa FPsc
Brara.G03499 1.0kb downstream 1.0kb downstream 1000 false A07: 26219400-26220399 Brassica rapa FPsc
Brara.G03499 2.0kb upstream 2.0kb upstream 4444 true A07: 26220400-26224843 Brassica rapa FPsc
Brara.G03499 2.0kb upstream 2.0kb upstream 2000 false A07: 26222844-26224843 Brassica rapa FPsc
Brara.G03499 2.0kb downstream 2.0kb downstream 4444 true A07: 26218400-26222843 Brassica rapa FPsc
Brara.G03499 2.0kb downstream 2.0kb downstream 2000 false A07: 26218400-26220399 Brassica rapa FPsc
Brara.G03499 5.0kb upstream 5.0kb upstream 7444 true A07: 26220400-26227843 Brassica rapa FPsc
Brara.G03499 5.0kb upstream 5.0kb upstream 5000 false A07: 26222844-26227843 Brassica rapa FPsc
Brara.G03499 5.0kb downstream 5.0kb downstream 7444 true A07: 26215400-26222843 Brassica rapa FPsc
Brara.G03499 5.0kb downstream 5.0kb downstream 5000 false A07: 26215400-26220399 Brassica rapa FPsc
Brara.G03499 10.0kb upstream 10.0kb upstream 12444 true A07: 26220400-26232843 Brassica rapa FPsc
Brara.G03499 10.0kb upstream 10.0kb upstream 10000 false A07: 26222844-26232843 Brassica rapa FPsc
Brara.G03499 10.0kb downstream 10.0kb downstream 12444 true A07: 26210400-26222843 Brassica rapa FPsc
Brara.G03499 10.0kb downstream 10.0kb downstream 10000 false A07: 26210400-26220399 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371112 5261 Brassicaceae View MSA
123831072 5264 Brassicales-Malvales View MSA
124342701 5266 SBM View MSA
124240106 5268 Malvidae View MSA
124064188 5270 Rosid View MSA
123746163 5271 Pentapetalae View MSA
122796652 5272 Eudicot View MSA
122045671 5273 Angiosperm View MSA
121346165 5274 Embryophyte View MSA
123425869 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier