Gene : Brara.B01343 B. rapa FPsc v1.3
Defline:  (1 of 1) KOG2720 - Predicted hydrolase (HIT family) Genomic Order:  1343
Name:  ? Brara.B01343 Secondary Identifier:  ? PAC:30608614
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-882 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.B01343 0.5kb upstream 0.5kb upstream 3027 true A02: 7044927-7047953 Brassica rapa FPsc
Brara.B01343 0.5kb upstream 0.5kb upstream 500 false A02: 7047454-7047953 Brassica rapa FPsc
Brara.B01343 0.5kb downstream 0.5kb downstream 3027 true A02: 7044427-7047453 Brassica rapa FPsc
Brara.B01343 0.5kb downstream 0.5kb downstream 500 false A02: 7044427-7044926 Brassica rapa FPsc
Brara.B01343 1.0kb upstream 1.0kb upstream 3527 true A02: 7044927-7048453 Brassica rapa FPsc
Brara.B01343 1.0kb upstream 1.0kb upstream 1000 false A02: 7047454-7048453 Brassica rapa FPsc
Brara.B01343 1.0kb downstream 1.0kb downstream 3527 true A02: 7043927-7047453 Brassica rapa FPsc
Brara.B01343 1.0kb downstream 1.0kb downstream 1000 false A02: 7043927-7044926 Brassica rapa FPsc
Brara.B01343 2.0kb upstream 2.0kb upstream 4527 true A02: 7044927-7049453 Brassica rapa FPsc
Brara.B01343 2.0kb upstream 2.0kb upstream 2000 false A02: 7047454-7049453 Brassica rapa FPsc
Brara.B01343 2.0kb downstream 2.0kb downstream 4527 true A02: 7042927-7047453 Brassica rapa FPsc
Brara.B01343 2.0kb downstream 2.0kb downstream 2000 false A02: 7042927-7044926 Brassica rapa FPsc
Brara.B01343 5.0kb upstream 5.0kb upstream 7527 true A02: 7044927-7052453 Brassica rapa FPsc
Brara.B01343 5.0kb upstream 5.0kb upstream 5000 false A02: 7047454-7052453 Brassica rapa FPsc
Brara.B01343 5.0kb downstream 5.0kb downstream 7527 true A02: 7039927-7047453 Brassica rapa FPsc
Brara.B01343 5.0kb downstream 5.0kb downstream 5000 false A02: 7039927-7044926 Brassica rapa FPsc
Brara.B01343 10.0kb upstream 10.0kb upstream 12527 true A02: 7044927-7057453 Brassica rapa FPsc
Brara.B01343 10.0kb upstream 10.0kb upstream 10000 false A02: 7047454-7057453 Brassica rapa FPsc
Brara.B01343 10.0kb downstream 10.0kb downstream 12527 true A02: 7034927-7047453 Brassica rapa FPsc
Brara.B01343 10.0kb downstream 10.0kb downstream 10000 false A02: 7034927-7044926 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122345041 5261 Brassicaceae Singleton cluster - no MSA
123842395 5264 Brassicales-Malvales View MSA
124323460 5266 SBM View MSA
124169478 5268 Malvidae View MSA
124042790 5270 Rosid View MSA
123751256 5271 Pentapetalae View MSA
122793442 5272 Eudicot View MSA
122044489 5273 Angiosperm View MSA
121349330 5274 Embryophyte View MSA
123424251 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier