Gene : Brara.G03316 B. rapa FPsc v1.3
Defline:  (1 of 4) 2.3.1.179 - Beta-ketoacyl-[acyl-carrier-protein] synthase II / KASII Genomic Order:  3316
Name:  ? Brara.G03316 Secondary Identifier:  ? PAC:30634541
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Sequence Feature Displayer

Ontology Annotation Displayer

8 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc FASYN-ELONG-PWY Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5156 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5971 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5973 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5989 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-6282 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7388 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7663 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.G03316 0.5kb upstream 0.5kb upstream 4340 true A07: 25277958-25282297 Brassica rapa FPsc
Brara.G03316 0.5kb upstream 0.5kb upstream 500 false A07: 25281798-25282297 Brassica rapa FPsc
Brara.G03316 0.5kb downstream 0.5kb downstream 4340 true A07: 25277458-25281797 Brassica rapa FPsc
Brara.G03316 0.5kb downstream 0.5kb downstream 500 false A07: 25277458-25277957 Brassica rapa FPsc
Brara.G03316 1.0kb upstream 1.0kb upstream 4840 true A07: 25277958-25282797 Brassica rapa FPsc
Brara.G03316 1.0kb upstream 1.0kb upstream 1000 false A07: 25281798-25282797 Brassica rapa FPsc
Brara.G03316 1.0kb downstream 1.0kb downstream 4840 true A07: 25276958-25281797 Brassica rapa FPsc
Brara.G03316 1.0kb downstream 1.0kb downstream 1000 false A07: 25276958-25277957 Brassica rapa FPsc
Brara.G03316 2.0kb upstream 2.0kb upstream 5840 true A07: 25277958-25283797 Brassica rapa FPsc
Brara.G03316 2.0kb upstream 2.0kb upstream 2000 false A07: 25281798-25283797 Brassica rapa FPsc
Brara.G03316 2.0kb downstream 2.0kb downstream 5840 true A07: 25275958-25281797 Brassica rapa FPsc
Brara.G03316 2.0kb downstream 2.0kb downstream 2000 false A07: 25275958-25277957 Brassica rapa FPsc
Brara.G03316 5.0kb upstream 5.0kb upstream 8840 true A07: 25277958-25286797 Brassica rapa FPsc
Brara.G03316 5.0kb upstream 5.0kb upstream 5000 false A07: 25281798-25286797 Brassica rapa FPsc
Brara.G03316 5.0kb downstream 5.0kb downstream 8840 true A07: 25272958-25281797 Brassica rapa FPsc
Brara.G03316 5.0kb downstream 5.0kb downstream 5000 false A07: 25272958-25277957 Brassica rapa FPsc
Brara.G03316 10.0kb upstream 10.0kb upstream 13840 true A07: 25277958-25291797 Brassica rapa FPsc
Brara.G03316 10.0kb upstream 10.0kb upstream 10000 false A07: 25281798-25291797 Brassica rapa FPsc
Brara.G03316 10.0kb downstream 10.0kb downstream 13840 true A07: 25267958-25281797 Brassica rapa FPsc
Brara.G03316 10.0kb downstream 10.0kb downstream 10000 false A07: 25267958-25277957 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377296 5261 Brassicaceae View MSA
123839489 5264 Brassicales-Malvales View MSA
124340409 5266 SBM View MSA
124244965 5268 Malvidae View MSA
124071420 5270 Rosid View MSA
123738483 5271 Pentapetalae View MSA
122792751 5272 Eudicot View MSA
122051170 5273 Angiosperm View MSA
121345587 5274 Embryophyte View MSA
123424058 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier