Gene : Brara.B00726 B. rapa FPsc v1.3
Defline:  (1 of 1) PTHR15495//PTHR15495:SF17 - NEGATIVE REGULATOR OF VESICLE FORMATION-RELATED Genomic Order:  726
Name:  ? Brara.B00726 Secondary Identifier:  ? PAC:30608064
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY66-399 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.B00726 0.5kb upstream 0.5kb upstream 2333 true A02: 3354009-3356341 Brassica rapa FPsc
Brara.B00726 0.5kb upstream 0.5kb upstream 500 false A02: 3355842-3356341 Brassica rapa FPsc
Brara.B00726 0.5kb downstream 0.5kb downstream 2333 true A02: 3353509-3355841 Brassica rapa FPsc
Brara.B00726 0.5kb downstream 0.5kb downstream 500 false A02: 3353509-3354008 Brassica rapa FPsc
Brara.B00726 1.0kb upstream 1.0kb upstream 2833 true A02: 3354009-3356841 Brassica rapa FPsc
Brara.B00726 1.0kb upstream 1.0kb upstream 1000 false A02: 3355842-3356841 Brassica rapa FPsc
Brara.B00726 1.0kb downstream 1.0kb downstream 2833 true A02: 3353009-3355841 Brassica rapa FPsc
Brara.B00726 1.0kb downstream 1.0kb downstream 1000 false A02: 3353009-3354008 Brassica rapa FPsc
Brara.B00726 2.0kb upstream 2.0kb upstream 3833 true A02: 3354009-3357841 Brassica rapa FPsc
Brara.B00726 2.0kb upstream 2.0kb upstream 2000 false A02: 3355842-3357841 Brassica rapa FPsc
Brara.B00726 2.0kb downstream 2.0kb downstream 3833 true A02: 3352009-3355841 Brassica rapa FPsc
Brara.B00726 2.0kb downstream 2.0kb downstream 2000 false A02: 3352009-3354008 Brassica rapa FPsc
Brara.B00726 5.0kb upstream 5.0kb upstream 6833 true A02: 3354009-3360841 Brassica rapa FPsc
Brara.B00726 5.0kb upstream 5.0kb upstream 5000 false A02: 3355842-3360841 Brassica rapa FPsc
Brara.B00726 5.0kb downstream 5.0kb downstream 6833 true A02: 3349009-3355841 Brassica rapa FPsc
Brara.B00726 5.0kb downstream 5.0kb downstream 5000 false A02: 3349009-3354008 Brassica rapa FPsc
Brara.B00726 10.0kb upstream 10.0kb upstream 11833 true A02: 3354009-3365841 Brassica rapa FPsc
Brara.B00726 10.0kb upstream 10.0kb upstream 10000 false A02: 3355842-3365841 Brassica rapa FPsc
Brara.B00726 10.0kb downstream 10.0kb downstream 11833 true A02: 3344009-3355841 Brassica rapa FPsc
Brara.B00726 10.0kb downstream 10.0kb downstream 10000 false A02: 3344009-3354008 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367163 5261 Brassicaceae View MSA
123832535 5264 Brassicales-Malvales View MSA
124339707 5266 SBM View MSA
124240599 5268 Malvidae View MSA
124065569 5270 Rosid View MSA
123747210 5271 Pentapetalae View MSA
122789939 5272 Eudicot View MSA
122045656 5273 Angiosperm View MSA
121347339 5274 Embryophyte View MSA
123426841 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier