Gene : Brara.H01217 B. rapa FPsc v1.3
Defline:  (1 of 5) 1.1.1.95 - Phosphoglycerate dehydrogenase / Phosphoglyceric acid dehydrogenase Genomic Order:  1217
Name:  ? Brara.H01217 Secondary Identifier:  ? PAC:30648321
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc SER-GLYSYN-PWY Brassica rapa FPsc pathologic  
BrapaFPsc SERSYN-PWY Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.H01217 0.5kb upstream 0.5kb upstream 2778 true A08: 13629320-13632097 Brassica rapa FPsc
Brara.H01217 0.5kb upstream 0.5kb upstream 500 false A08: 13629320-13629819 Brassica rapa FPsc
Brara.H01217 0.5kb downstream 0.5kb downstream 2778 true A08: 13629820-13632597 Brassica rapa FPsc
Brara.H01217 0.5kb downstream 0.5kb downstream 500 false A08: 13632098-13632597 Brassica rapa FPsc
Brara.H01217 1.0kb upstream 1.0kb upstream 3278 true A08: 13628820-13632097 Brassica rapa FPsc
Brara.H01217 1.0kb upstream 1.0kb upstream 1000 false A08: 13628820-13629819 Brassica rapa FPsc
Brara.H01217 1.0kb downstream 1.0kb downstream 3278 true A08: 13629820-13633097 Brassica rapa FPsc
Brara.H01217 1.0kb downstream 1.0kb downstream 1000 false A08: 13632098-13633097 Brassica rapa FPsc
Brara.H01217 2.0kb upstream 2.0kb upstream 4278 true A08: 13627820-13632097 Brassica rapa FPsc
Brara.H01217 2.0kb upstream 2.0kb upstream 2000 false A08: 13627820-13629819 Brassica rapa FPsc
Brara.H01217 2.0kb downstream 2.0kb downstream 4278 true A08: 13629820-13634097 Brassica rapa FPsc
Brara.H01217 2.0kb downstream 2.0kb downstream 2000 false A08: 13632098-13634097 Brassica rapa FPsc
Brara.H01217 5.0kb upstream 5.0kb upstream 7278 true A08: 13624820-13632097 Brassica rapa FPsc
Brara.H01217 5.0kb upstream 5.0kb upstream 5000 false A08: 13624820-13629819 Brassica rapa FPsc
Brara.H01217 5.0kb downstream 5.0kb downstream 7278 true A08: 13629820-13637097 Brassica rapa FPsc
Brara.H01217 5.0kb downstream 5.0kb downstream 5000 false A08: 13632098-13637097 Brassica rapa FPsc
Brara.H01217 10.0kb upstream 10.0kb upstream 12278 true A08: 13619820-13632097 Brassica rapa FPsc
Brara.H01217 10.0kb upstream 10.0kb upstream 10000 false A08: 13619820-13629819 Brassica rapa FPsc
Brara.H01217 10.0kb downstream 10.0kb downstream 12278 true A08: 13629820-13642097 Brassica rapa FPsc
Brara.H01217 10.0kb downstream 10.0kb downstream 10000 false A08: 13632098-13642097 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377940 5261 Brassicaceae View MSA
123828170 5264 Brassicales-Malvales View MSA
124344584 5266 SBM View MSA
124245424 5268 Malvidae View MSA
124071894 5270 Rosid View MSA
123750282 5271 Pentapetalae View MSA
122795023 5272 Eudicot View MSA
122044765 5273 Angiosperm View MSA
121347094 5274 Embryophyte View MSA
123427510 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier