Gene : Brara.H01085 B. rapa FPsc v1.3
Defline:  (1 of 3) PF03807//PF14833 - NADP oxidoreductase coenzyme F420-dependent (F420_oxidored) // NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase (NAD_binding_11) Genomic Order:  1085
Name:  ? Brara.H01085 Secondary Identifier:  ? PAC:30650035
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc VALDEG-PWY Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.H01085 0.5kb upstream 0.5kb upstream 2908 true A08: 12611271-12614178 Brassica rapa FPsc
Brara.H01085 0.5kb upstream 0.5kb upstream 500 false A08: 12611271-12611770 Brassica rapa FPsc
Brara.H01085 0.5kb downstream 0.5kb downstream 2908 true A08: 12611771-12614678 Brassica rapa FPsc
Brara.H01085 0.5kb downstream 0.5kb downstream 500 false A08: 12614179-12614678 Brassica rapa FPsc
Brara.H01085 1.0kb upstream 1.0kb upstream 3408 true A08: 12610771-12614178 Brassica rapa FPsc
Brara.H01085 1.0kb upstream 1.0kb upstream 1000 false A08: 12610771-12611770 Brassica rapa FPsc
Brara.H01085 1.0kb downstream 1.0kb downstream 3408 true A08: 12611771-12615178 Brassica rapa FPsc
Brara.H01085 1.0kb downstream 1.0kb downstream 1000 false A08: 12614179-12615178 Brassica rapa FPsc
Brara.H01085 2.0kb upstream 2.0kb upstream 4408 true A08: 12609771-12614178 Brassica rapa FPsc
Brara.H01085 2.0kb upstream 2.0kb upstream 2000 false A08: 12609771-12611770 Brassica rapa FPsc
Brara.H01085 2.0kb downstream 2.0kb downstream 4408 true A08: 12611771-12616178 Brassica rapa FPsc
Brara.H01085 2.0kb downstream 2.0kb downstream 2000 false A08: 12614179-12616178 Brassica rapa FPsc
Brara.H01085 5.0kb upstream 5.0kb upstream 7408 true A08: 12606771-12614178 Brassica rapa FPsc
Brara.H01085 5.0kb upstream 5.0kb upstream 5000 false A08: 12606771-12611770 Brassica rapa FPsc
Brara.H01085 5.0kb downstream 5.0kb downstream 7408 true A08: 12611771-12619178 Brassica rapa FPsc
Brara.H01085 5.0kb downstream 5.0kb downstream 5000 false A08: 12614179-12619178 Brassica rapa FPsc
Brara.H01085 10.0kb upstream 10.0kb upstream 12408 true A08: 12601771-12614178 Brassica rapa FPsc
Brara.H01085 10.0kb upstream 10.0kb upstream 10000 false A08: 12601771-12611770 Brassica rapa FPsc
Brara.H01085 10.0kb downstream 10.0kb downstream 12408 true A08: 12611771-12624178 Brassica rapa FPsc
Brara.H01085 10.0kb downstream 10.0kb downstream 10000 false A08: 12614179-12624178 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377505 5261 Brassicaceae View MSA
123831545 5264 Brassicales-Malvales View MSA
124341286 5266 SBM View MSA
124237017 5268 Malvidae View MSA
124062564 5270 Rosid View MSA
123738883 5271 Pentapetalae View MSA
122787575 5272 Eudicot View MSA
122045971 5273 Angiosperm View MSA
121347535 5274 Embryophyte View MSA
123424560 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier