Gene : Brara.B00829 B. rapa FPsc v1.3
Defline:  (1 of 2) 2.5.1.22//2.5.1.79 - Spermine synthase / Spermidine aminopropyltransferase Genomic Order:  829
Name:  ? Brara.B00829 Secondary Identifier:  ? PAC:30610318
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc ARGSPECAT-PWY Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.B00829 0.5kb upstream 0.5kb upstream 2552 true A02: 3918818-3921369 Brassica rapa FPsc
Brara.B00829 0.5kb upstream 0.5kb upstream 500 false A02: 3920870-3921369 Brassica rapa FPsc
Brara.B00829 0.5kb downstream 0.5kb downstream 2552 true A02: 3918318-3920869 Brassica rapa FPsc
Brara.B00829 0.5kb downstream 0.5kb downstream 500 false A02: 3918318-3918817 Brassica rapa FPsc
Brara.B00829 1.0kb upstream 1.0kb upstream 3052 true A02: 3918818-3921869 Brassica rapa FPsc
Brara.B00829 1.0kb upstream 1.0kb upstream 1000 false A02: 3920870-3921869 Brassica rapa FPsc
Brara.B00829 1.0kb downstream 1.0kb downstream 3052 true A02: 3917818-3920869 Brassica rapa FPsc
Brara.B00829 1.0kb downstream 1.0kb downstream 1000 false A02: 3917818-3918817 Brassica rapa FPsc
Brara.B00829 2.0kb upstream 2.0kb upstream 4052 true A02: 3918818-3922869 Brassica rapa FPsc
Brara.B00829 2.0kb upstream 2.0kb upstream 2000 false A02: 3920870-3922869 Brassica rapa FPsc
Brara.B00829 2.0kb downstream 2.0kb downstream 4052 true A02: 3916818-3920869 Brassica rapa FPsc
Brara.B00829 2.0kb downstream 2.0kb downstream 2000 false A02: 3916818-3918817 Brassica rapa FPsc
Brara.B00829 5.0kb upstream 5.0kb upstream 7052 true A02: 3918818-3925869 Brassica rapa FPsc
Brara.B00829 5.0kb upstream 5.0kb upstream 5000 false A02: 3920870-3925869 Brassica rapa FPsc
Brara.B00829 5.0kb downstream 5.0kb downstream 7052 true A02: 3913818-3920869 Brassica rapa FPsc
Brara.B00829 5.0kb downstream 5.0kb downstream 5000 false A02: 3913818-3918817 Brassica rapa FPsc
Brara.B00829 10.0kb upstream 10.0kb upstream 12052 true A02: 3918818-3930869 Brassica rapa FPsc
Brara.B00829 10.0kb upstream 10.0kb upstream 10000 false A02: 3920870-3930869 Brassica rapa FPsc
Brara.B00829 10.0kb downstream 10.0kb downstream 12052 true A02: 3908818-3920869 Brassica rapa FPsc
Brara.B00829 10.0kb downstream 10.0kb downstream 10000 false A02: 3908818-3918817 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367295 5261 Brassicaceae View MSA
123830996 5264 Brassicales-Malvales View MSA
124336686 5266 SBM View MSA
124242056 5268 Malvidae View MSA
124068940 5270 Rosid View MSA
123748388 5271 Pentapetalae View MSA
122794179 5272 Eudicot View MSA
122050339 5273 Angiosperm View MSA
121346949 5274 Embryophyte View MSA
123426712 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier