Gene : Brara.B00600 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR13931 - UBIQUITINATION FACTOR E4 Genomic Order:  600
Name:  ? Brara.B00600 Secondary Identifier:  ? PAC:30610258
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-7511 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.B00600 0.5kb upstream 0.5kb upstream 5723 true A02: 2753353-2759075 Brassica rapa FPsc
Brara.B00600 0.5kb upstream 0.5kb upstream 500 false A02: 2758576-2759075 Brassica rapa FPsc
Brara.B00600 0.5kb downstream 0.5kb downstream 5723 true A02: 2752853-2758575 Brassica rapa FPsc
Brara.B00600 0.5kb downstream 0.5kb downstream 500 false A02: 2752853-2753352 Brassica rapa FPsc
Brara.B00600 1.0kb upstream 1.0kb upstream 6223 true A02: 2753353-2759575 Brassica rapa FPsc
Brara.B00600 1.0kb upstream 1.0kb upstream 1000 false A02: 2758576-2759575 Brassica rapa FPsc
Brara.B00600 1.0kb downstream 1.0kb downstream 6223 true A02: 2752353-2758575 Brassica rapa FPsc
Brara.B00600 1.0kb downstream 1.0kb downstream 1000 false A02: 2752353-2753352 Brassica rapa FPsc
Brara.B00600 2.0kb upstream 2.0kb upstream 7223 true A02: 2753353-2760575 Brassica rapa FPsc
Brara.B00600 2.0kb upstream 2.0kb upstream 2000 false A02: 2758576-2760575 Brassica rapa FPsc
Brara.B00600 2.0kb downstream 2.0kb downstream 7223 true A02: 2751353-2758575 Brassica rapa FPsc
Brara.B00600 2.0kb downstream 2.0kb downstream 2000 false A02: 2751353-2753352 Brassica rapa FPsc
Brara.B00600 5.0kb upstream 5.0kb upstream 10223 true A02: 2753353-2763575 Brassica rapa FPsc
Brara.B00600 5.0kb upstream 5.0kb upstream 5000 false A02: 2758576-2763575 Brassica rapa FPsc
Brara.B00600 5.0kb downstream 5.0kb downstream 10223 true A02: 2748353-2758575 Brassica rapa FPsc
Brara.B00600 5.0kb downstream 5.0kb downstream 5000 false A02: 2748353-2753352 Brassica rapa FPsc
Brara.B00600 10.0kb upstream 10.0kb upstream 15223 true A02: 2753353-2768575 Brassica rapa FPsc
Brara.B00600 10.0kb upstream 10.0kb upstream 10000 false A02: 2758576-2768575 Brassica rapa FPsc
Brara.B00600 10.0kb downstream 10.0kb downstream 15223 true A02: 2743353-2758575 Brassica rapa FPsc
Brara.B00600 10.0kb downstream 10.0kb downstream 10000 false A02: 2743353-2753352 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362364 5261 Brassicaceae View MSA
123828990 5264 Brassicales-Malvales View MSA
124345802 5266 SBM View MSA
124240977 5268 Malvidae View MSA
124063394 5270 Rosid View MSA
123741006 5271 Pentapetalae View MSA
122793160 5272 Eudicot View MSA
122042023 5273 Angiosperm View MSA
121344944 5274 Embryophyte View MSA
123426697 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier