Gene : Brara.D02682 B. rapa FPsc v1.3
Defline:  (1 of 3) PTHR31807:SF6 - PROTEIN ENDOSPERM DEFECTIVE 1-RELATED Genomic Order:  2682
Name:  ? Brara.D02682 Secondary Identifier:  ? PAC:30620144
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.D02682 0.5kb upstream 0.5kb upstream 2186 true A04: 20578867-20581052 Brassica rapa FPsc
Brara.D02682 0.5kb upstream 0.5kb upstream 500 false A04: 20578867-20579366 Brassica rapa FPsc
Brara.D02682 0.5kb downstream 0.5kb downstream 2186 true A04: 20579367-20581552 Brassica rapa FPsc
Brara.D02682 0.5kb downstream 0.5kb downstream 500 false A04: 20581053-20581552 Brassica rapa FPsc
Brara.D02682 1.0kb upstream 1.0kb upstream 2686 true A04: 20578367-20581052 Brassica rapa FPsc
Brara.D02682 1.0kb upstream 1.0kb upstream 1000 false A04: 20578367-20579366 Brassica rapa FPsc
Brara.D02682 1.0kb downstream 1.0kb downstream 2686 true A04: 20579367-20582052 Brassica rapa FPsc
Brara.D02682 1.0kb downstream 1.0kb downstream 1000 false A04: 20581053-20582052 Brassica rapa FPsc
Brara.D02682 2.0kb upstream 2.0kb upstream 3686 true A04: 20577367-20581052 Brassica rapa FPsc
Brara.D02682 2.0kb upstream 2.0kb upstream 2000 false A04: 20577367-20579366 Brassica rapa FPsc
Brara.D02682 2.0kb downstream 2.0kb downstream 3686 true A04: 20579367-20583052 Brassica rapa FPsc
Brara.D02682 2.0kb downstream 2.0kb downstream 2000 false A04: 20581053-20583052 Brassica rapa FPsc
Brara.D02682 5.0kb upstream 5.0kb upstream 6686 true A04: 20574367-20581052 Brassica rapa FPsc
Brara.D02682 5.0kb upstream 5.0kb upstream 5000 false A04: 20574367-20579366 Brassica rapa FPsc
Brara.D02682 5.0kb downstream 5.0kb downstream 6686 true A04: 20579367-20586052 Brassica rapa FPsc
Brara.D02682 5.0kb downstream 5.0kb downstream 5000 false A04: 20581053-20586052 Brassica rapa FPsc
Brara.D02682 10.0kb upstream 10.0kb upstream 11686 true A04: 20569367-20581052 Brassica rapa FPsc
Brara.D02682 10.0kb upstream 10.0kb upstream 10000 false A04: 20569367-20579366 Brassica rapa FPsc
Brara.D02682 10.0kb downstream 10.0kb downstream 11686 true A04: 20579367-20591052 Brassica rapa FPsc
Brara.D02682 10.0kb downstream 10.0kb downstream 10000 false A04: 20581053-20591052 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122348280 5261 Brassicaceae Singleton cluster - no MSA
123787651 5264 Brassicales-Malvales Singleton cluster - no MSA
124285715 5266 SBM Singleton cluster - no MSA
124139702 5268 Malvidae Singleton cluster - no MSA
124067070 5270 Rosid View MSA
123752575 5271 Pentapetalae View MSA
122788375 5272 Eudicot View MSA
122044458 5273 Angiosperm View MSA
121348675 5274 Embryophyte View MSA
123426167 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier