Gene : Brara.B00492 B. rapa FPsc v1.3
Defline:  (1 of 3) PTHR10683:SF6 - TRANSALDOLASE-RELATED Genomic Order:  492
Name:  ? Brara.B00492 Secondary Identifier:  ? PAC:30609818
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc NONOXIPENT-PWY Brassica rapa FPsc pathologic  
BrapaFPsc PENTOSE-P-PWY Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5723 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.B00492 0.5kb upstream 0.5kb upstream 3092 true A02: 2305403-2308494 Brassica rapa FPsc
Brara.B00492 0.5kb upstream 0.5kb upstream 500 false A02: 2307995-2308494 Brassica rapa FPsc
Brara.B00492 0.5kb downstream 0.5kb downstream 3092 true A02: 2304903-2307994 Brassica rapa FPsc
Brara.B00492 0.5kb downstream 0.5kb downstream 500 false A02: 2304903-2305402 Brassica rapa FPsc
Brara.B00492 1.0kb upstream 1.0kb upstream 3592 true A02: 2305403-2308994 Brassica rapa FPsc
Brara.B00492 1.0kb upstream 1.0kb upstream 1000 false A02: 2307995-2308994 Brassica rapa FPsc
Brara.B00492 1.0kb downstream 1.0kb downstream 3592 true A02: 2304403-2307994 Brassica rapa FPsc
Brara.B00492 1.0kb downstream 1.0kb downstream 1000 false A02: 2304403-2305402 Brassica rapa FPsc
Brara.B00492 2.0kb upstream 2.0kb upstream 4592 true A02: 2305403-2309994 Brassica rapa FPsc
Brara.B00492 2.0kb upstream 2.0kb upstream 2000 false A02: 2307995-2309994 Brassica rapa FPsc
Brara.B00492 2.0kb downstream 2.0kb downstream 4592 true A02: 2303403-2307994 Brassica rapa FPsc
Brara.B00492 2.0kb downstream 2.0kb downstream 2000 false A02: 2303403-2305402 Brassica rapa FPsc
Brara.B00492 5.0kb upstream 5.0kb upstream 7592 true A02: 2305403-2312994 Brassica rapa FPsc
Brara.B00492 5.0kb upstream 5.0kb upstream 5000 false A02: 2307995-2312994 Brassica rapa FPsc
Brara.B00492 5.0kb downstream 5.0kb downstream 7592 true A02: 2300403-2307994 Brassica rapa FPsc
Brara.B00492 5.0kb downstream 5.0kb downstream 5000 false A02: 2300403-2305402 Brassica rapa FPsc
Brara.B00492 10.0kb upstream 10.0kb upstream 12592 true A02: 2305403-2317994 Brassica rapa FPsc
Brara.B00492 10.0kb upstream 10.0kb upstream 10000 false A02: 2307995-2317994 Brassica rapa FPsc
Brara.B00492 10.0kb downstream 10.0kb downstream 12592 true A02: 2295403-2307994 Brassica rapa FPsc
Brara.B00492 10.0kb downstream 10.0kb downstream 10000 false A02: 2295403-2305402 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373845 5261 Brassicaceae View MSA
123827398 5264 Brassicales-Malvales View MSA
124337524 5266 SBM View MSA
124240084 5268 Malvidae View MSA
124064365 5270 Rosid View MSA
123743559 5271 Pentapetalae View MSA
122786857 5272 Eudicot View MSA
122044911 5273 Angiosperm View MSA
121343866 5274 Embryophyte View MSA
123379934 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier