Gene : Brara.B00494 B. rapa FPsc v1.3
Defline:  (1 of 5) PTHR10134:SF1 - CYTOCHROME B-C1 COMPLEX SUBUNIT RIESKE, MITOCHONDRIAL Genomic Order:  494
Name:  ? Brara.B00494 Secondary Identifier:  ? PAC:30607311
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-3781 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7279 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.B00494 0.5kb upstream 0.5kb upstream 2326 true A02: 2310813-2313138 Brassica rapa FPsc
Brara.B00494 0.5kb upstream 0.5kb upstream 500 false A02: 2312639-2313138 Brassica rapa FPsc
Brara.B00494 0.5kb downstream 0.5kb downstream 2326 true A02: 2310313-2312638 Brassica rapa FPsc
Brara.B00494 0.5kb downstream 0.5kb downstream 500 false A02: 2310313-2310812 Brassica rapa FPsc
Brara.B00494 1.0kb upstream 1.0kb upstream 2826 true A02: 2310813-2313638 Brassica rapa FPsc
Brara.B00494 1.0kb upstream 1.0kb upstream 1000 false A02: 2312639-2313638 Brassica rapa FPsc
Brara.B00494 1.0kb downstream 1.0kb downstream 2826 true A02: 2309813-2312638 Brassica rapa FPsc
Brara.B00494 1.0kb downstream 1.0kb downstream 1000 false A02: 2309813-2310812 Brassica rapa FPsc
Brara.B00494 2.0kb upstream 2.0kb upstream 3826 true A02: 2310813-2314638 Brassica rapa FPsc
Brara.B00494 2.0kb upstream 2.0kb upstream 2000 false A02: 2312639-2314638 Brassica rapa FPsc
Brara.B00494 2.0kb downstream 2.0kb downstream 3826 true A02: 2308813-2312638 Brassica rapa FPsc
Brara.B00494 2.0kb downstream 2.0kb downstream 2000 false A02: 2308813-2310812 Brassica rapa FPsc
Brara.B00494 5.0kb upstream 5.0kb upstream 6826 true A02: 2310813-2317638 Brassica rapa FPsc
Brara.B00494 5.0kb upstream 5.0kb upstream 5000 false A02: 2312639-2317638 Brassica rapa FPsc
Brara.B00494 5.0kb downstream 5.0kb downstream 6826 true A02: 2305813-2312638 Brassica rapa FPsc
Brara.B00494 5.0kb downstream 5.0kb downstream 5000 false A02: 2305813-2310812 Brassica rapa FPsc
Brara.B00494 10.0kb upstream 10.0kb upstream 11826 true A02: 2310813-2322638 Brassica rapa FPsc
Brara.B00494 10.0kb upstream 10.0kb upstream 10000 false A02: 2312639-2322638 Brassica rapa FPsc
Brara.B00494 10.0kb downstream 10.0kb downstream 11826 true A02: 2300813-2312638 Brassica rapa FPsc
Brara.B00494 10.0kb downstream 10.0kb downstream 10000 false A02: 2300813-2310812 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122344609 5261 Brassicaceae Singleton cluster - no MSA
123784592 5264 Brassicales-Malvales Singleton cluster - no MSA
124282761 5266 SBM Singleton cluster - no MSA
124250960 5268 Malvidae View MSA
124070196 5270 Rosid View MSA
123743313 5271 Pentapetalae View MSA
122789519 5272 Eudicot View MSA
122049860 5273 Angiosperm View MSA
121345913 5274 Embryophyte View MSA
123424462 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier