Gene : Brara.H00594 B. rapa FPsc v1.3
Defline:  (1 of 2) PTHR11387:SF17 - CYTOCHROME C OXIDASE SUBUNIT 6B-LIKE-RELATED Genomic Order:  594
Name:  ? Brara.H00594 Secondary Identifier:  ? PAC:30649103
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-3781 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7279 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.H00594 0.5kb upstream 0.5kb upstream 1193 true A08: 7248064-7249256 Brassica rapa FPsc
Brara.H00594 0.5kb upstream 0.5kb upstream 500 false A08: 7248757-7249256 Brassica rapa FPsc
Brara.H00594 0.5kb downstream 0.5kb downstream 1193 true A08: 7247564-7248756 Brassica rapa FPsc
Brara.H00594 0.5kb downstream 0.5kb downstream 500 false A08: 7247564-7248063 Brassica rapa FPsc
Brara.H00594 1.0kb upstream 1.0kb upstream 1693 true A08: 7248064-7249756 Brassica rapa FPsc
Brara.H00594 1.0kb upstream 1.0kb upstream 1000 false A08: 7248757-7249756 Brassica rapa FPsc
Brara.H00594 1.0kb downstream 1.0kb downstream 1693 true A08: 7247064-7248756 Brassica rapa FPsc
Brara.H00594 1.0kb downstream 1.0kb downstream 1000 false A08: 7247064-7248063 Brassica rapa FPsc
Brara.H00594 2.0kb upstream 2.0kb upstream 2693 true A08: 7248064-7250756 Brassica rapa FPsc
Brara.H00594 2.0kb upstream 2.0kb upstream 2000 false A08: 7248757-7250756 Brassica rapa FPsc
Brara.H00594 2.0kb downstream 2.0kb downstream 2693 true A08: 7246064-7248756 Brassica rapa FPsc
Brara.H00594 2.0kb downstream 2.0kb downstream 2000 false A08: 7246064-7248063 Brassica rapa FPsc
Brara.H00594 5.0kb upstream 5.0kb upstream 5693 true A08: 7248064-7253756 Brassica rapa FPsc
Brara.H00594 5.0kb upstream 5.0kb upstream 5000 false A08: 7248757-7253756 Brassica rapa FPsc
Brara.H00594 5.0kb downstream 5.0kb downstream 5693 true A08: 7243064-7248756 Brassica rapa FPsc
Brara.H00594 5.0kb downstream 5.0kb downstream 5000 false A08: 7243064-7248063 Brassica rapa FPsc
Brara.H00594 10.0kb upstream 10.0kb upstream 10693 true A08: 7248064-7258756 Brassica rapa FPsc
Brara.H00594 10.0kb upstream 10.0kb upstream 10000 false A08: 7248757-7258756 Brassica rapa FPsc
Brara.H00594 10.0kb downstream 10.0kb downstream 10693 true A08: 7238064-7248756 Brassica rapa FPsc
Brara.H00594 10.0kb downstream 10.0kb downstream 10000 false A08: 7238064-7248063 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379506 5261 Brassicaceae View MSA
123835927 5264 Brassicales-Malvales View MSA
124322107 5266 SBM View MSA
124251643 5268 Malvidae View MSA
124072730 5270 Rosid View MSA
123743678 5271 Pentapetalae View MSA
122770737 5272 Eudicot View MSA
122050829 5273 Angiosperm View MSA
121351047 5274 Embryophyte View MSA
123424784 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier