Gene : Brara.D02646 B. rapa FPsc v1.3
Defline:  (1 of 3) PF00314//PF07714 - Thaumatin family (Thaumatin) // Protein tyrosine kinase (Pkinase_Tyr) Genomic Order:  2646
Name:  ? Brara.D02646 Secondary Identifier:  ? PAC:30622674
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-7409 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.D02646 0.5kb upstream 0.5kb upstream 5005 true A04: 20452120-20457124 Brassica rapa FPsc
Brara.D02646 0.5kb upstream 0.5kb upstream 500 false A04: 20452120-20452619 Brassica rapa FPsc
Brara.D02646 0.5kb downstream 0.5kb downstream 5005 true A04: 20452620-20457624 Brassica rapa FPsc
Brara.D02646 0.5kb downstream 0.5kb downstream 500 false A04: 20457125-20457624 Brassica rapa FPsc
Brara.D02646 1.0kb upstream 1.0kb upstream 5505 true A04: 20451620-20457124 Brassica rapa FPsc
Brara.D02646 1.0kb upstream 1.0kb upstream 1000 false A04: 20451620-20452619 Brassica rapa FPsc
Brara.D02646 1.0kb downstream 1.0kb downstream 5505 true A04: 20452620-20458124 Brassica rapa FPsc
Brara.D02646 1.0kb downstream 1.0kb downstream 1000 false A04: 20457125-20458124 Brassica rapa FPsc
Brara.D02646 2.0kb upstream 2.0kb upstream 6505 true A04: 20450620-20457124 Brassica rapa FPsc
Brara.D02646 2.0kb upstream 2.0kb upstream 2000 false A04: 20450620-20452619 Brassica rapa FPsc
Brara.D02646 2.0kb downstream 2.0kb downstream 6505 true A04: 20452620-20459124 Brassica rapa FPsc
Brara.D02646 2.0kb downstream 2.0kb downstream 2000 false A04: 20457125-20459124 Brassica rapa FPsc
Brara.D02646 5.0kb upstream 5.0kb upstream 9505 true A04: 20447620-20457124 Brassica rapa FPsc
Brara.D02646 5.0kb upstream 5.0kb upstream 5000 false A04: 20447620-20452619 Brassica rapa FPsc
Brara.D02646 5.0kb downstream 5.0kb downstream 9505 true A04: 20452620-20462124 Brassica rapa FPsc
Brara.D02646 5.0kb downstream 5.0kb downstream 5000 false A04: 20457125-20462124 Brassica rapa FPsc
Brara.D02646 10.0kb upstream 10.0kb upstream 14505 true A04: 20442620-20457124 Brassica rapa FPsc
Brara.D02646 10.0kb upstream 10.0kb upstream 10000 false A04: 20442620-20452619 Brassica rapa FPsc
Brara.D02646 10.0kb downstream 10.0kb downstream 14505 true A04: 20452620-20467124 Brassica rapa FPsc
Brara.D02646 10.0kb downstream 10.0kb downstream 10000 false A04: 20457125-20467124 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381708 5261 Brassicaceae View MSA
123841678 5264 Brassicales-Malvales View MSA
124350842 5266 SBM View MSA
124254633 5268 Malvidae View MSA
124074937 5270 Rosid View MSA
123753765 5271 Pentapetalae View MSA
122797900 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

0 Rna Seq Expressions

1 Strain

DB identifier