Gene : Brara.H00617 B. rapa FPsc v1.3
Defline:  (1 of 1) PTHR11746//PTHR11746:SF81 - O-METHYLTRANSFERASE Genomic Order:  617
Name:  ? Brara.H00617 Secondary Identifier:  ? PAC:30647327
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-1121 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-2181 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-361 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-5168 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-7186 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.H00617 0.5kb upstream 0.5kb upstream 2030 true A08: 7928553-7930582 Brassica rapa FPsc
Brara.H00617 0.5kb upstream 0.5kb upstream 500 false A08: 7930083-7930582 Brassica rapa FPsc
Brara.H00617 0.5kb downstream 0.5kb downstream 2030 true A08: 7928053-7930082 Brassica rapa FPsc
Brara.H00617 0.5kb downstream 0.5kb downstream 500 false A08: 7928053-7928552 Brassica rapa FPsc
Brara.H00617 1.0kb upstream 1.0kb upstream 2530 true A08: 7928553-7931082 Brassica rapa FPsc
Brara.H00617 1.0kb upstream 1.0kb upstream 1000 false A08: 7930083-7931082 Brassica rapa FPsc
Brara.H00617 1.0kb downstream 1.0kb downstream 2530 true A08: 7927553-7930082 Brassica rapa FPsc
Brara.H00617 1.0kb downstream 1.0kb downstream 1000 false A08: 7927553-7928552 Brassica rapa FPsc
Brara.H00617 2.0kb upstream 2.0kb upstream 3530 true A08: 7928553-7932082 Brassica rapa FPsc
Brara.H00617 2.0kb upstream 2.0kb upstream 2000 false A08: 7930083-7932082 Brassica rapa FPsc
Brara.H00617 2.0kb downstream 2.0kb downstream 3530 true A08: 7926553-7930082 Brassica rapa FPsc
Brara.H00617 2.0kb downstream 2.0kb downstream 2000 false A08: 7926553-7928552 Brassica rapa FPsc
Brara.H00617 5.0kb upstream 5.0kb upstream 6530 true A08: 7928553-7935082 Brassica rapa FPsc
Brara.H00617 5.0kb upstream 5.0kb upstream 5000 false A08: 7930083-7935082 Brassica rapa FPsc
Brara.H00617 5.0kb downstream 5.0kb downstream 6530 true A08: 7923553-7930082 Brassica rapa FPsc
Brara.H00617 5.0kb downstream 5.0kb downstream 5000 false A08: 7923553-7928552 Brassica rapa FPsc
Brara.H00617 10.0kb upstream 10.0kb upstream 11530 true A08: 7928553-7940082 Brassica rapa FPsc
Brara.H00617 10.0kb upstream 10.0kb upstream 10000 false A08: 7930083-7940082 Brassica rapa FPsc
Brara.H00617 10.0kb downstream 10.0kb downstream 11530 true A08: 7918553-7930082 Brassica rapa FPsc
Brara.H00617 10.0kb downstream 10.0kb downstream 10000 false A08: 7918553-7928552 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121779242 5273 Angiosperm View MSA
122371650 5261 Brassicaceae View MSA
123833647 5264 Brassicales-Malvales View MSA
124321883 5266 SBM View MSA
124252155 5268 Malvidae View MSA
124072400 5270 Rosid View MSA
123741470 5271 Pentapetalae View MSA
122770057 5272 Eudicot View MSA
123429068 5275 Viridiplantae View MSA
121050916 5274 Embryophyte View MSA

0 Rna Seq Expressions

1 Strain

DB identifier