Gene : Brara.H00624 B. rapa FPsc v1.3
Defline:  (1 of 8) PF00288//PF08544 - GHMP kinases N terminal domain (GHMP_kinases_N) // GHMP kinases C terminal (GHMP_kinases_C) Genomic Order:  624
Name:  ? Brara.H00624 Secondary Identifier:  ? PAC:30648986
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Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-5910 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-922 Brassica rapa FPsc pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.H00624 0.5kb upstream 0.5kb upstream 3612 true A08: 8096920-8100531 Brassica rapa FPsc
Brara.H00624 0.5kb upstream 0.5kb upstream 500 false A08: 8096920-8097419 Brassica rapa FPsc
Brara.H00624 0.5kb downstream 0.5kb downstream 3612 true A08: 8097420-8101031 Brassica rapa FPsc
Brara.H00624 0.5kb downstream 0.5kb downstream 500 false A08: 8100532-8101031 Brassica rapa FPsc
Brara.H00624 1.0kb upstream 1.0kb upstream 4112 true A08: 8096420-8100531 Brassica rapa FPsc
Brara.H00624 1.0kb upstream 1.0kb upstream 1000 false A08: 8096420-8097419 Brassica rapa FPsc
Brara.H00624 1.0kb downstream 1.0kb downstream 4112 true A08: 8097420-8101531 Brassica rapa FPsc
Brara.H00624 1.0kb downstream 1.0kb downstream 1000 false A08: 8100532-8101531 Brassica rapa FPsc
Brara.H00624 2.0kb upstream 2.0kb upstream 5112 true A08: 8095420-8100531 Brassica rapa FPsc
Brara.H00624 2.0kb upstream 2.0kb upstream 2000 false A08: 8095420-8097419 Brassica rapa FPsc
Brara.H00624 2.0kb downstream 2.0kb downstream 5112 true A08: 8097420-8102531 Brassica rapa FPsc
Brara.H00624 2.0kb downstream 2.0kb downstream 2000 false A08: 8100532-8102531 Brassica rapa FPsc
Brara.H00624 5.0kb upstream 5.0kb upstream 8112 true A08: 8092420-8100531 Brassica rapa FPsc
Brara.H00624 5.0kb upstream 5.0kb upstream 5000 false A08: 8092420-8097419 Brassica rapa FPsc
Brara.H00624 5.0kb downstream 5.0kb downstream 8112 true A08: 8097420-8105531 Brassica rapa FPsc
Brara.H00624 5.0kb downstream 5.0kb downstream 5000 false A08: 8100532-8105531 Brassica rapa FPsc
Brara.H00624 10.0kb upstream 10.0kb upstream 13112 true A08: 8087420-8100531 Brassica rapa FPsc
Brara.H00624 10.0kb upstream 10.0kb upstream 10000 false A08: 8087420-8097419 Brassica rapa FPsc
Brara.H00624 10.0kb downstream 10.0kb downstream 13112 true A08: 8097420-8110531 Brassica rapa FPsc
Brara.H00624 10.0kb downstream 10.0kb downstream 10000 false A08: 8100532-8110531 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365721 5261 Brassicaceae View MSA
123834522 5264 Brassicales-Malvales View MSA
124336505 5266 SBM View MSA
124239577 5268 Malvidae View MSA
124060690 5270 Rosid View MSA
123748529 5271 Pentapetalae View MSA
122787383 5272 Eudicot View MSA
122043495 5273 Angiosperm View MSA
121345412 5274 Embryophyte View MSA
123380212 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier