Gene : Brara.B00561 B. rapa FPsc v1.3
Defline:  (1 of 1) PTHR23068//PTHR23068:SF12 - DNA CYTOSINE-5- -METHYLTRANSFERASE 3-RELATED Genomic Order:  561
Name:  ? Brara.B00561 Secondary Identifier:  ? PAC:30607733
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.B00561 0.5kb upstream 0.5kb upstream 2548 true A02: 2560486-2563033 Brassica rapa FPsc
Brara.B00561 0.5kb upstream 0.5kb upstream 500 false A02: 2562534-2563033 Brassica rapa FPsc
Brara.B00561 0.5kb downstream 0.5kb downstream 2548 true A02: 2559986-2562533 Brassica rapa FPsc
Brara.B00561 0.5kb downstream 0.5kb downstream 500 false A02: 2559986-2560485 Brassica rapa FPsc
Brara.B00561 1.0kb upstream 1.0kb upstream 3048 true A02: 2560486-2563533 Brassica rapa FPsc
Brara.B00561 1.0kb upstream 1.0kb upstream 1000 false A02: 2562534-2563533 Brassica rapa FPsc
Brara.B00561 1.0kb downstream 1.0kb downstream 3048 true A02: 2559486-2562533 Brassica rapa FPsc
Brara.B00561 1.0kb downstream 1.0kb downstream 1000 false A02: 2559486-2560485 Brassica rapa FPsc
Brara.B00561 2.0kb upstream 2.0kb upstream 4048 true A02: 2560486-2564533 Brassica rapa FPsc
Brara.B00561 2.0kb upstream 2.0kb upstream 2000 false A02: 2562534-2564533 Brassica rapa FPsc
Brara.B00561 2.0kb downstream 2.0kb downstream 4048 true A02: 2558486-2562533 Brassica rapa FPsc
Brara.B00561 2.0kb downstream 2.0kb downstream 2000 false A02: 2558486-2560485 Brassica rapa FPsc
Brara.B00561 5.0kb upstream 5.0kb upstream 7048 true A02: 2560486-2567533 Brassica rapa FPsc
Brara.B00561 5.0kb upstream 5.0kb upstream 5000 false A02: 2562534-2567533 Brassica rapa FPsc
Brara.B00561 5.0kb downstream 5.0kb downstream 7048 true A02: 2555486-2562533 Brassica rapa FPsc
Brara.B00561 5.0kb downstream 5.0kb downstream 5000 false A02: 2555486-2560485 Brassica rapa FPsc
Brara.B00561 10.0kb upstream 10.0kb upstream 12048 true A02: 2560486-2572533 Brassica rapa FPsc
Brara.B00561 10.0kb upstream 10.0kb upstream 10000 false A02: 2562534-2572533 Brassica rapa FPsc
Brara.B00561 10.0kb downstream 10.0kb downstream 12048 true A02: 2550486-2562533 Brassica rapa FPsc
Brara.B00561 10.0kb downstream 10.0kb downstream 10000 false A02: 2550486-2560485 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122344752 5261 Brassicaceae Singleton cluster - no MSA
123784708 5264 Brassicales-Malvales Singleton cluster - no MSA
124282874 5266 SBM Singleton cluster - no MSA
124256148 5268 Malvidae View MSA
124041980 5270 Rosid View MSA
123754807 5271 Pentapetalae View MSA
122798827 5272 Eudicot View MSA
122049231 5273 Angiosperm View MSA
121350699 5274 Embryophyte View MSA
123381851 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier