Gene : Brara.D02668 B. rapa FPsc v1.3
Defline:  (1 of 4) PTHR31375:SF31 - F3F20.10 PROTEIN-RELATED Genomic Order:  2668
Name:  ? Brara.D02668 Secondary Identifier:  ? PAC:30621201
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-1081 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.D02668 0.5kb upstream 0.5kb upstream 2125 true A04: 20524281-20526405 Brassica rapa FPsc
Brara.D02668 0.5kb upstream 0.5kb upstream 500 false A04: 20524281-20524780 Brassica rapa FPsc
Brara.D02668 0.5kb downstream 0.5kb downstream 2125 true A04: 20524781-20526905 Brassica rapa FPsc
Brara.D02668 0.5kb downstream 0.5kb downstream 500 false A04: 20526406-20526905 Brassica rapa FPsc
Brara.D02668 1.0kb upstream 1.0kb upstream 2625 true A04: 20523781-20526405 Brassica rapa FPsc
Brara.D02668 1.0kb upstream 1.0kb upstream 1000 false A04: 20523781-20524780 Brassica rapa FPsc
Brara.D02668 1.0kb downstream 1.0kb downstream 2625 true A04: 20524781-20527405 Brassica rapa FPsc
Brara.D02668 1.0kb downstream 1.0kb downstream 1000 false A04: 20526406-20527405 Brassica rapa FPsc
Brara.D02668 2.0kb upstream 2.0kb upstream 3625 true A04: 20522781-20526405 Brassica rapa FPsc
Brara.D02668 2.0kb upstream 2.0kb upstream 2000 false A04: 20522781-20524780 Brassica rapa FPsc
Brara.D02668 2.0kb downstream 2.0kb downstream 3625 true A04: 20524781-20528405 Brassica rapa FPsc
Brara.D02668 2.0kb downstream 2.0kb downstream 2000 false A04: 20526406-20528405 Brassica rapa FPsc
Brara.D02668 5.0kb upstream 5.0kb upstream 6625 true A04: 20519781-20526405 Brassica rapa FPsc
Brara.D02668 5.0kb upstream 5.0kb upstream 5000 false A04: 20519781-20524780 Brassica rapa FPsc
Brara.D02668 5.0kb downstream 5.0kb downstream 6625 true A04: 20524781-20531405 Brassica rapa FPsc
Brara.D02668 5.0kb downstream 5.0kb downstream 5000 false A04: 20526406-20531405 Brassica rapa FPsc
Brara.D02668 10.0kb upstream 10.0kb upstream 11625 true A04: 20514781-20526405 Brassica rapa FPsc
Brara.D02668 10.0kb upstream 10.0kb upstream 10000 false A04: 20514781-20524780 Brassica rapa FPsc
Brara.D02668 10.0kb downstream 10.0kb downstream 11625 true A04: 20524781-20536405 Brassica rapa FPsc
Brara.D02668 10.0kb downstream 10.0kb downstream 10000 false A04: 20526406-20536405 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122348560 5261 Brassicaceae Singleton cluster - no MSA
123839902 5264 Brassicales-Malvales View MSA
124322664 5266 SBM View MSA
124241850 5268 Malvidae View MSA
124074410 5270 Rosid View MSA
123753570 5271 Pentapetalae View MSA
122797497 5272 Eudicot View MSA
122051291 5273 Angiosperm View MSA
121350352 5274 Embryophyte View MSA
123381691 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier