Gene : Brara.H00651 B. rapa FPsc v1.3
Defline:  (1 of 3) PTHR34455:SF1 - EXPRESSED PROTEIN Genomic Order:  651
Name:  ? Brara.H00651 Secondary Identifier:  ? PAC:30647774
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PHOTOALL-PWY Brassica rapa FPsc pathologic  
BrapaFPsc PWY-101 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.H00651 0.5kb upstream 0.5kb upstream 8158 true A08: 8518802-8526959 Brassica rapa FPsc
Brara.H00651 0.5kb upstream 0.5kb upstream 500 false A08: 8518802-8519301 Brassica rapa FPsc
Brara.H00651 0.5kb downstream 0.5kb downstream 8158 true A08: 8519302-8527459 Brassica rapa FPsc
Brara.H00651 0.5kb downstream 0.5kb downstream 500 false A08: 8526960-8527459 Brassica rapa FPsc
Brara.H00651 1.0kb upstream 1.0kb upstream 8658 true A08: 8518302-8526959 Brassica rapa FPsc
Brara.H00651 1.0kb upstream 1.0kb upstream 1000 false A08: 8518302-8519301 Brassica rapa FPsc
Brara.H00651 1.0kb downstream 1.0kb downstream 8658 true A08: 8519302-8527959 Brassica rapa FPsc
Brara.H00651 1.0kb downstream 1.0kb downstream 1000 false A08: 8526960-8527959 Brassica rapa FPsc
Brara.H00651 2.0kb upstream 2.0kb upstream 9658 true A08: 8517302-8526959 Brassica rapa FPsc
Brara.H00651 2.0kb upstream 2.0kb upstream 2000 false A08: 8517302-8519301 Brassica rapa FPsc
Brara.H00651 2.0kb downstream 2.0kb downstream 9658 true A08: 8519302-8528959 Brassica rapa FPsc
Brara.H00651 2.0kb downstream 2.0kb downstream 2000 false A08: 8526960-8528959 Brassica rapa FPsc
Brara.H00651 5.0kb upstream 5.0kb upstream 12658 true A08: 8514302-8526959 Brassica rapa FPsc
Brara.H00651 5.0kb upstream 5.0kb upstream 5000 false A08: 8514302-8519301 Brassica rapa FPsc
Brara.H00651 5.0kb downstream 5.0kb downstream 12658 true A08: 8519302-8531959 Brassica rapa FPsc
Brara.H00651 5.0kb downstream 5.0kb downstream 5000 false A08: 8526960-8531959 Brassica rapa FPsc
Brara.H00651 10.0kb upstream 10.0kb upstream 17658 true A08: 8509302-8526959 Brassica rapa FPsc
Brara.H00651 10.0kb upstream 10.0kb upstream 10000 false A08: 8509302-8519301 Brassica rapa FPsc
Brara.H00651 10.0kb downstream 10.0kb downstream 17658 true A08: 8519302-8536959 Brassica rapa FPsc
Brara.H00651 10.0kb downstream 10.0kb downstream 10000 false A08: 8526960-8536959 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122356019 5261 Brassicaceae View MSA
123839864 5264 Brassicales-Malvales View MSA
124349923 5266 SBM View MSA
124245307 5268 Malvidae View MSA
124072175 5270 Rosid View MSA
123739685 5271 Pentapetalae View MSA
122793757 5272 Eudicot View MSA
122041544 5273 Angiosperm View MSA
121346235 5274 Embryophyte View MSA
123428099 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier