Gene : Brara.H00565 B. rapa FPsc v1.3
Defline:  (1 of 4) PTHR22593:SF8 - PARALLEL SPINDLE 1 PROTEIN Genomic Order:  565
Name:  ? Brara.H00565 Secondary Identifier:  ? PAC:30647842
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.H00565 0.5kb upstream 0.5kb upstream 3162 true A08: 6810004-6813165 Brassica rapa FPsc
Brara.H00565 0.5kb upstream 0.5kb upstream 500 false A08: 6810004-6810503 Brassica rapa FPsc
Brara.H00565 0.5kb downstream 0.5kb downstream 3162 true A08: 6810504-6813665 Brassica rapa FPsc
Brara.H00565 0.5kb downstream 0.5kb downstream 500 false A08: 6813166-6813665 Brassica rapa FPsc
Brara.H00565 1.0kb upstream 1.0kb upstream 3662 true A08: 6809504-6813165 Brassica rapa FPsc
Brara.H00565 1.0kb upstream 1.0kb upstream 1000 false A08: 6809504-6810503 Brassica rapa FPsc
Brara.H00565 1.0kb downstream 1.0kb downstream 3662 true A08: 6810504-6814165 Brassica rapa FPsc
Brara.H00565 1.0kb downstream 1.0kb downstream 1000 false A08: 6813166-6814165 Brassica rapa FPsc
Brara.H00565 2.0kb upstream 2.0kb upstream 4662 true A08: 6808504-6813165 Brassica rapa FPsc
Brara.H00565 2.0kb upstream 2.0kb upstream 2000 false A08: 6808504-6810503 Brassica rapa FPsc
Brara.H00565 2.0kb downstream 2.0kb downstream 4662 true A08: 6810504-6815165 Brassica rapa FPsc
Brara.H00565 2.0kb downstream 2.0kb downstream 2000 false A08: 6813166-6815165 Brassica rapa FPsc
Brara.H00565 5.0kb upstream 5.0kb upstream 7662 true A08: 6805504-6813165 Brassica rapa FPsc
Brara.H00565 5.0kb upstream 5.0kb upstream 5000 false A08: 6805504-6810503 Brassica rapa FPsc
Brara.H00565 5.0kb downstream 5.0kb downstream 7662 true A08: 6810504-6818165 Brassica rapa FPsc
Brara.H00565 5.0kb downstream 5.0kb downstream 5000 false A08: 6813166-6818165 Brassica rapa FPsc
Brara.H00565 10.0kb upstream 10.0kb upstream 12662 true A08: 6800504-6813165 Brassica rapa FPsc
Brara.H00565 10.0kb upstream 10.0kb upstream 10000 false A08: 6800504-6810503 Brassica rapa FPsc
Brara.H00565 10.0kb downstream 10.0kb downstream 12662 true A08: 6810504-6823165 Brassica rapa FPsc
Brara.H00565 10.0kb downstream 10.0kb downstream 10000 false A08: 6813166-6823165 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122355051 5261 Brassicaceae Singleton cluster - no MSA
123793352 5264 Brassicales-Malvales Singleton cluster - no MSA
124291195 5266 SBM Singleton cluster - no MSA
124144189 5268 Malvidae Singleton cluster - no MSA
123870770 5270 Rosid Singleton cluster - no MSA
123746877 5271 Pentapetalae View MSA
122794534 5272 Eudicot View MSA
122048794 5273 Angiosperm View MSA
121349514 5274 Embryophyte View MSA
123381341 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier