Gene : Brara.H00364 B. rapa FPsc v1.3
Defline:  (1 of 5) PTHR12418:SF33 - 1,4-DIHYDROXY-2-NAPHTHOYL-COA THIOESTERASE 1 Genomic Order:  364
Name:  ? Brara.H00364 Secondary Identifier:  ? PAC:30649374
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-5837 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.H00364 0.5kb upstream 0.5kb upstream 1310 true A08: 3448634-3449943 Brassica rapa FPsc
Brara.H00364 0.5kb upstream 0.5kb upstream 500 false A08: 3448634-3449133 Brassica rapa FPsc
Brara.H00364 0.5kb downstream 0.5kb downstream 1310 true A08: 3449134-3450443 Brassica rapa FPsc
Brara.H00364 0.5kb downstream 0.5kb downstream 500 false A08: 3449944-3450443 Brassica rapa FPsc
Brara.H00364 1.0kb upstream 1.0kb upstream 1810 true A08: 3448134-3449943 Brassica rapa FPsc
Brara.H00364 1.0kb upstream 1.0kb upstream 1000 false A08: 3448134-3449133 Brassica rapa FPsc
Brara.H00364 1.0kb downstream 1.0kb downstream 1810 true A08: 3449134-3450943 Brassica rapa FPsc
Brara.H00364 1.0kb downstream 1.0kb downstream 1000 false A08: 3449944-3450943 Brassica rapa FPsc
Brara.H00364 2.0kb upstream 2.0kb upstream 2810 true A08: 3447134-3449943 Brassica rapa FPsc
Brara.H00364 2.0kb upstream 2.0kb upstream 2000 false A08: 3447134-3449133 Brassica rapa FPsc
Brara.H00364 2.0kb downstream 2.0kb downstream 2810 true A08: 3449134-3451943 Brassica rapa FPsc
Brara.H00364 2.0kb downstream 2.0kb downstream 2000 false A08: 3449944-3451943 Brassica rapa FPsc
Brara.H00364 5.0kb upstream 5.0kb upstream 5810 true A08: 3444134-3449943 Brassica rapa FPsc
Brara.H00364 5.0kb upstream 5.0kb upstream 5000 false A08: 3444134-3449133 Brassica rapa FPsc
Brara.H00364 5.0kb downstream 5.0kb downstream 5810 true A08: 3449134-3454943 Brassica rapa FPsc
Brara.H00364 5.0kb downstream 5.0kb downstream 5000 false A08: 3449944-3454943 Brassica rapa FPsc
Brara.H00364 10.0kb upstream 10.0kb upstream 10810 true A08: 3439134-3449943 Brassica rapa FPsc
Brara.H00364 10.0kb upstream 10.0kb upstream 10000 false A08: 3439134-3449133 Brassica rapa FPsc
Brara.H00364 10.0kb downstream 10.0kb downstream 10810 true A08: 3449134-3459943 Brassica rapa FPsc
Brara.H00364 10.0kb downstream 10.0kb downstream 10000 false A08: 3449944-3459943 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361560 5261 Brassicaceae View MSA
123835813 5264 Brassicales-Malvales View MSA
124338385 5266 SBM View MSA
124248114 5268 Malvidae View MSA
124067278 5270 Rosid View MSA
123738374 5271 Pentapetalae View MSA
122791322 5272 Eudicot View MSA
122042191 5273 Angiosperm View MSA
121348407 5274 Embryophyte View MSA
123380851 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier