Gene : Brara.H00380 B. rapa FPsc v1.3
Defline:  (1 of 1) PF00168//PF06101//PF12624//PF16908//PF16910 - C2 domain (C2) // Plant protein of unknown function (DUF946) (DUF946) // N-terminal region of Chorein or VPS13 (Chorein_N) // Vacuolar sorting-associated protein 13, N-terminal (VPS13) // Repeating coiled region of VPS13 (VPS13_mid_rpt) Genomic Order:  380
Name:  ? Brara.H00380 Secondary Identifier:  ? PAC:30650243
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.H00380 0.5kb upstream 0.5kb upstream 20899 true A08: 3606079-3626977 Brassica rapa FPsc
Brara.H00380 0.5kb upstream 0.5kb upstream 500 false A08: 3606079-3606578 Brassica rapa FPsc
Brara.H00380 0.5kb downstream 0.5kb downstream 20899 true A08: 3606579-3627477 Brassica rapa FPsc
Brara.H00380 0.5kb downstream 0.5kb downstream 500 false A08: 3626978-3627477 Brassica rapa FPsc
Brara.H00380 1.0kb upstream 1.0kb upstream 21399 true A08: 3605579-3626977 Brassica rapa FPsc
Brara.H00380 1.0kb upstream 1.0kb upstream 1000 false A08: 3605579-3606578 Brassica rapa FPsc
Brara.H00380 1.0kb downstream 1.0kb downstream 21399 true A08: 3606579-3627977 Brassica rapa FPsc
Brara.H00380 1.0kb downstream 1.0kb downstream 1000 false A08: 3626978-3627977 Brassica rapa FPsc
Brara.H00380 2.0kb upstream 2.0kb upstream 22399 true A08: 3604579-3626977 Brassica rapa FPsc
Brara.H00380 2.0kb upstream 2.0kb upstream 2000 false A08: 3604579-3606578 Brassica rapa FPsc
Brara.H00380 2.0kb downstream 2.0kb downstream 22399 true A08: 3606579-3628977 Brassica rapa FPsc
Brara.H00380 2.0kb downstream 2.0kb downstream 2000 false A08: 3626978-3628977 Brassica rapa FPsc
Brara.H00380 5.0kb upstream 5.0kb upstream 25399 true A08: 3601579-3626977 Brassica rapa FPsc
Brara.H00380 5.0kb upstream 5.0kb upstream 5000 false A08: 3601579-3606578 Brassica rapa FPsc
Brara.H00380 5.0kb downstream 5.0kb downstream 25399 true A08: 3606579-3631977 Brassica rapa FPsc
Brara.H00380 5.0kb downstream 5.0kb downstream 5000 false A08: 3626978-3631977 Brassica rapa FPsc
Brara.H00380 10.0kb upstream 10.0kb upstream 30399 true A08: 3596579-3626977 Brassica rapa FPsc
Brara.H00380 10.0kb upstream 10.0kb upstream 10000 false A08: 3596579-3606578 Brassica rapa FPsc
Brara.H00380 10.0kb downstream 10.0kb downstream 30399 true A08: 3606579-3636977 Brassica rapa FPsc
Brara.H00380 10.0kb downstream 10.0kb downstream 10000 false A08: 3626978-3636977 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122355767 5261 Brassicaceae Singleton cluster - no MSA
123839985 5264 Brassicales-Malvales View MSA
124346137 5266 SBM View MSA
124237267 5268 Malvidae View MSA
124063980 5270 Rosid View MSA
123740207 5271 Pentapetalae View MSA
122785969 5272 Eudicot View MSA
122048720 5273 Angiosperm View MSA
121349358 5274 Embryophyte View MSA
123424206 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier