Gene : Brara.D02605 B. rapa FPsc v1.3
Defline:  (1 of 4) PTHR31707:SF29 - PECTINESTERASE/PECTINESTERASE INHIBITOR 16-RELATED Genomic Order:  2605
Name:  ? Brara.D02605 Secondary Identifier:  ? PAC:30622455
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-1081 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.D02605 0.5kb upstream 0.5kb upstream 5694 true A04: 20227894-20233587 Brassica rapa FPsc
Brara.D02605 0.5kb upstream 0.5kb upstream 500 false A04: 20227894-20228393 Brassica rapa FPsc
Brara.D02605 0.5kb downstream 0.5kb downstream 5694 true A04: 20228394-20234087 Brassica rapa FPsc
Brara.D02605 0.5kb downstream 0.5kb downstream 500 false A04: 20233588-20234087 Brassica rapa FPsc
Brara.D02605 1.0kb upstream 1.0kb upstream 6194 true A04: 20227394-20233587 Brassica rapa FPsc
Brara.D02605 1.0kb upstream 1.0kb upstream 1000 false A04: 20227394-20228393 Brassica rapa FPsc
Brara.D02605 1.0kb downstream 1.0kb downstream 6194 true A04: 20228394-20234587 Brassica rapa FPsc
Brara.D02605 1.0kb downstream 1.0kb downstream 1000 false A04: 20233588-20234587 Brassica rapa FPsc
Brara.D02605 2.0kb upstream 2.0kb upstream 7194 true A04: 20226394-20233587 Brassica rapa FPsc
Brara.D02605 2.0kb upstream 2.0kb upstream 2000 false A04: 20226394-20228393 Brassica rapa FPsc
Brara.D02605 2.0kb downstream 2.0kb downstream 7194 true A04: 20228394-20235587 Brassica rapa FPsc
Brara.D02605 2.0kb downstream 2.0kb downstream 2000 false A04: 20233588-20235587 Brassica rapa FPsc
Brara.D02605 5.0kb upstream 5.0kb upstream 10194 true A04: 20223394-20233587 Brassica rapa FPsc
Brara.D02605 5.0kb upstream 5.0kb upstream 5000 false A04: 20223394-20228393 Brassica rapa FPsc
Brara.D02605 5.0kb downstream 5.0kb downstream 10194 true A04: 20228394-20238587 Brassica rapa FPsc
Brara.D02605 5.0kb downstream 5.0kb downstream 5000 false A04: 20233588-20238587 Brassica rapa FPsc
Brara.D02605 10.0kb upstream 10.0kb upstream 15194 true A04: 20218394-20233587 Brassica rapa FPsc
Brara.D02605 10.0kb upstream 10.0kb upstream 10000 false A04: 20218394-20228393 Brassica rapa FPsc
Brara.D02605 10.0kb downstream 10.0kb downstream 15194 true A04: 20228394-20243587 Brassica rapa FPsc
Brara.D02605 10.0kb downstream 10.0kb downstream 10000 false A04: 20233588-20243587 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376609 5261 Brassicaceae View MSA
123801306 5264 Brassicales-Malvales View MSA
124298628 5266 SBM View MSA
124252795 5268 Malvidae View MSA
124068551 5270 Rosid View MSA
123627858 5271 Pentapetalae View MSA
122790137 5272 Eudicot View MSA
122051530 5273 Angiosperm View MSA
121350573 5274 Embryophyte View MSA
123381802 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier