Gene : Brara.H02091 B. rapa FPsc v1.3
Defline:  (1 of 1) 3.5.1.108 - UDP-3-O-acyl-N-acetylglucosamine deacetylase / UDP-3-O-acyl-GlcNAc deacetylase Genomic Order:  2091
Name:  ? Brara.H02091 Secondary Identifier:  ? PAC:30649615
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc NAGLIPASYN-PWY Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.H02091 0.5kb upstream 0.5kb upstream 2968 true A08: 18725589-18728556 Brassica rapa FPsc
Brara.H02091 0.5kb upstream 0.5kb upstream 500 false A08: 18725589-18726088 Brassica rapa FPsc
Brara.H02091 0.5kb downstream 0.5kb downstream 2968 true A08: 18726089-18729056 Brassica rapa FPsc
Brara.H02091 0.5kb downstream 0.5kb downstream 500 false A08: 18728557-18729056 Brassica rapa FPsc
Brara.H02091 1.0kb upstream 1.0kb upstream 3468 true A08: 18725089-18728556 Brassica rapa FPsc
Brara.H02091 1.0kb upstream 1.0kb upstream 1000 false A08: 18725089-18726088 Brassica rapa FPsc
Brara.H02091 1.0kb downstream 1.0kb downstream 3468 true A08: 18726089-18729556 Brassica rapa FPsc
Brara.H02091 1.0kb downstream 1.0kb downstream 1000 false A08: 18728557-18729556 Brassica rapa FPsc
Brara.H02091 2.0kb upstream 2.0kb upstream 4468 true A08: 18724089-18728556 Brassica rapa FPsc
Brara.H02091 2.0kb upstream 2.0kb upstream 2000 false A08: 18724089-18726088 Brassica rapa FPsc
Brara.H02091 2.0kb downstream 2.0kb downstream 4468 true A08: 18726089-18730556 Brassica rapa FPsc
Brara.H02091 2.0kb downstream 2.0kb downstream 2000 false A08: 18728557-18730556 Brassica rapa FPsc
Brara.H02091 5.0kb upstream 5.0kb upstream 7468 true A08: 18721089-18728556 Brassica rapa FPsc
Brara.H02091 5.0kb upstream 5.0kb upstream 5000 false A08: 18721089-18726088 Brassica rapa FPsc
Brara.H02091 5.0kb downstream 5.0kb downstream 7468 true A08: 18726089-18733556 Brassica rapa FPsc
Brara.H02091 5.0kb downstream 5.0kb downstream 5000 false A08: 18728557-18733556 Brassica rapa FPsc
Brara.H02091 10.0kb upstream 10.0kb upstream 12468 true A08: 18716089-18728556 Brassica rapa FPsc
Brara.H02091 10.0kb upstream 10.0kb upstream 10000 false A08: 18716089-18726088 Brassica rapa FPsc
Brara.H02091 10.0kb downstream 10.0kb downstream 12468 true A08: 18726089-18738556 Brassica rapa FPsc
Brara.H02091 10.0kb downstream 10.0kb downstream 10000 false A08: 18728557-18738556 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365511 5261 Brassicaceae View MSA
123830520 5264 Brassicales-Malvales View MSA
124344354 5266 SBM View MSA
124241167 5268 Malvidae View MSA
124073632 5270 Rosid View MSA
123739136 5271 Pentapetalae View MSA
122793269 5272 Eudicot View MSA
122046520 5273 Angiosperm View MSA
121346728 5274 Embryophyte View MSA
123424011 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier