Gene : Brara.H02089 B. rapa FPsc v1.3
Defline:  (1 of 7) 2.1.1.104 - Caffeoyl-CoA O-methyltransferase / Trans-caffeoyl-CoA 3-O-methyltransferase Genomic Order:  2089
Name:  ? Brara.H02089 Secondary Identifier:  ? PAC:30648352
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
BrapaFPsc PWY-1121 Brassica rapa FPsc pathologic  
BrapaFPsc PWY-361 Brassica rapa FPsc pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brara.H02089 0.5kb upstream 0.5kb upstream 2444 true A08: 18714530-18716973 Brassica rapa FPsc
Brara.H02089 0.5kb upstream 0.5kb upstream 500 false A08: 18714530-18715029 Brassica rapa FPsc
Brara.H02089 0.5kb downstream 0.5kb downstream 2444 true A08: 18715030-18717473 Brassica rapa FPsc
Brara.H02089 0.5kb downstream 0.5kb downstream 500 false A08: 18716974-18717473 Brassica rapa FPsc
Brara.H02089 1.0kb upstream 1.0kb upstream 2944 true A08: 18714030-18716973 Brassica rapa FPsc
Brara.H02089 1.0kb upstream 1.0kb upstream 1000 false A08: 18714030-18715029 Brassica rapa FPsc
Brara.H02089 1.0kb downstream 1.0kb downstream 2944 true A08: 18715030-18717973 Brassica rapa FPsc
Brara.H02089 1.0kb downstream 1.0kb downstream 1000 false A08: 18716974-18717973 Brassica rapa FPsc
Brara.H02089 2.0kb upstream 2.0kb upstream 3944 true A08: 18713030-18716973 Brassica rapa FPsc
Brara.H02089 2.0kb upstream 2.0kb upstream 2000 false A08: 18713030-18715029 Brassica rapa FPsc
Brara.H02089 2.0kb downstream 2.0kb downstream 3944 true A08: 18715030-18718973 Brassica rapa FPsc
Brara.H02089 2.0kb downstream 2.0kb downstream 2000 false A08: 18716974-18718973 Brassica rapa FPsc
Brara.H02089 5.0kb upstream 5.0kb upstream 6944 true A08: 18710030-18716973 Brassica rapa FPsc
Brara.H02089 5.0kb upstream 5.0kb upstream 5000 false A08: 18710030-18715029 Brassica rapa FPsc
Brara.H02089 5.0kb downstream 5.0kb downstream 6944 true A08: 18715030-18721973 Brassica rapa FPsc
Brara.H02089 5.0kb downstream 5.0kb downstream 5000 false A08: 18716974-18721973 Brassica rapa FPsc
Brara.H02089 10.0kb upstream 10.0kb upstream 11944 true A08: 18705030-18716973 Brassica rapa FPsc
Brara.H02089 10.0kb upstream 10.0kb upstream 10000 false A08: 18705030-18715029 Brassica rapa FPsc
Brara.H02089 10.0kb downstream 10.0kb downstream 11944 true A08: 18715030-18726973 Brassica rapa FPsc
Brara.H02089 10.0kb downstream 10.0kb downstream 10000 false A08: 18716974-18726973 Brassica rapa FPsc

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121779201 5273 Angiosperm View MSA
122360483 5261 Brassicaceae View MSA
123838295 5264 Brassicales-Malvales View MSA
124322431 5266 SBM View MSA
124247989 5268 Malvidae View MSA
124066642 5270 Rosid View MSA
123738230 5271 Pentapetalae View MSA
122769915 5272 Eudicot View MSA
121050882 5274 Embryophyte View MSA
123427843 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier